| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is prs [H]
Identifier: 110634504
GI number: 110634504
Start: 2306092
End: 2307024
Strand: Direct
Name: prs [H]
Synonym: Meso_2155
Alternate gene names: 110634504
Gene position: 2306092-2307024 (Clockwise)
Preceding gene: 110634503
Following gene: 110634506
Centisome position: 52.26
GC content: 61.09
Gene sequence:
>933_bases ATGAAGCTTTTTGCGGGCAATTCCAACCGGGTGCTGGCCGAGGCCATTGCCCGCTACCTCAACATTTCACTCGGCAAGGC GATGGTCCGCCGTTTCGCAGATCAGGAGATCTTTGTCGAAATCCAGGAGAATGTGCGCGGCGAGGACGTTTTCGTCCTGC AGTCCACCTCCTATCCGGCGAACGATCACCTGATGGAACTGCTCATCATGATCGACGCATTCCGCCGCTCCTCGGCCCGC CGCATCACGGCAGTGCTTCCCTATTTCGGCTATGCGCGGCAGGACCGCCGCACTTCGGGCCGCACTCCGATCTCCGCCAA GCTGGTGGCAAATCTGATTACCCAGGCCGGCGCCGACCGCGTGCTGACGCTTGACCTCCATGCCGGCCAGATCCAGGGGT TCTTCGATATTCCGACGGACAATCTCTACGCGGTGCCGGTCATGGCGCGTGACGTGAAGGCCCATTACAAGCTTGAAAAC GTGATGGTCGTTTCCCCCGATGTCGGCGGCGTCGTGCGCGCCCGCGCGCTCGCCAAGCGCATCGATGCCCCGCTCGCCAT CGTCGACAAGCGCCGCGACCGTCCCGGCGAGTCGGAGGTGATGAACGTCATCGGCGACGTTCATGGCCGGGATTGCCTGC TGATCGATGATATCGTCGATTCCGGCGGCACGCTCTGCAACGCTGCCGAAGCACTGATCGCCAATGGAGCGACGAGCGTT ACGGCCTATATCACCCATGGCGTGCTCTCGGGCGGAGCCGTGGCAAGGATCACCGGTTCGAAGCTCAAGGAACTGGTGAT AACGGACTCCATTCAGCCGACCTCGTCGGTGGAAGCCGCCCATAATATCCGCGCCATAACGATCGCCGACCTAATCGGAG AGGCAATCTCGCGGACGGCTTCGGAAGAATCGGTTTCGAGCCTTTTCAACTAA
Upstream 100 bases:
>100_bases GCCGCACCAAACGAAGTGTGTATCGGCTATTCGCCCTTGCAATCATTGGCAACGCCGCTAAAAGCCCGGATTGAAACGTG GCGTCGGCCGGGATCACTCC
Downstream 100 bases:
>100_bases GACATTACTCGATCGCCGCGCCGCGCTCGGCCAGGAGAGACCGCAGGATGGAGCGGTGGCAGCGCGCTTCATCTTCGCAA TAGCAGCCGATCGAGAAATC
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MKLFAGNSNRVLAEAIARYLNISLGKAMVRRFADQEIFVEIQENVRGEDVFVLQSTSYPANDHLMELLIMIDAFRRSSAR RITAVLPYFGYARQDRRTSGRTPISAKLVANLITQAGADRVLTLDLHAGQIQGFFDIPTDNLYAVPVMARDVKAHYKLEN VMVVSPDVGGVVRARALAKRIDAPLAIVDKRRDRPGESEVMNVIGDVHGRDCLLIDDIVDSGGTLCNAAEALIANGATSV TAYITHGVLSGGAVARITGSKLKELVITDSIQPTSSVEAAHNIRAITIADLIGEAISRTASEESVSSLFN
Sequences:
>Translated_310_residues MKLFAGNSNRVLAEAIARYLNISLGKAMVRRFADQEIFVEIQENVRGEDVFVLQSTSYPANDHLMELLIMIDAFRRSSAR RITAVLPYFGYARQDRRTSGRTPISAKLVANLITQAGADRVLTLDLHAGQIQGFFDIPTDNLYAVPVMARDVKAHYKLEN VMVVSPDVGGVVRARALAKRIDAPLAIVDKRRDRPGESEVMNVIGDVHGRDCLLIDDIVDSGGTLCNAAEALIANGATSV TAYITHGVLSGGAVARITGSKLKELVITDSIQPTSSVEAAHNIRAITIADLIGEAISRTASEESVSSLFN >Mature_310_residues MKLFAGNSNRVLAEAIARYLNISLGKAMVRRFADQEIFVEIQENVRGEDVFVLQSTSYPANDHLMELLIMIDAFRRSSAR RITAVLPYFGYARQDRRTSGRTPISAKLVANLITQAGADRVLTLDLHAGQIQGFFDIPTDNLYAVPVMARDVKAHYKLEN VMVVSPDVGGVVRARALAKRIDAPLAIVDKRRDRPGESEVMNVIGDVHGRDCLLIDDIVDSGGTLCNAAEALIANGATSV TAYITHGVLSGGAVARITGSKLKELVITDSIQPTSSVEAAHNIRAITIADLIGEAISRTASEESVSSLFN
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506127, Length=311, Percent_Identity=45.9807073954984, Blast_Score=295, Evalue=3e-80, Organism=Homo sapiens, GI4506129, Length=309, Percent_Identity=45.6310679611651, Blast_Score=293, Evalue=2e-79, Organism=Homo sapiens, GI28557709, Length=311, Percent_Identity=45.3376205787781, Blast_Score=291, Evalue=4e-79, Organism=Homo sapiens, GI84875539, Length=312, Percent_Identity=45.1923076923077, Blast_Score=287, Evalue=7e-78, Organism=Homo sapiens, GI4506133, Length=342, Percent_Identity=34.5029239766082, Blast_Score=175, Evalue=5e-44, Organism=Homo sapiens, GI194018537, Length=344, Percent_Identity=32.5581395348837, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI310128524, Length=141, Percent_Identity=33.3333333333333, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI310115209, Length=141, Percent_Identity=33.3333333333333, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI310118259, Length=141, Percent_Identity=33.3333333333333, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI310119946, Length=141, Percent_Identity=33.3333333333333, Blast_Score=88, Evalue=1e-17, Organism=Escherichia coli, GI1787458, Length=311, Percent_Identity=54.6623794212219, Blast_Score=348, Evalue=3e-97, Organism=Caenorhabditis elegans, GI25149168, Length=311, Percent_Identity=44.0514469453376, Blast_Score=283, Evalue=1e-76, Organism=Caenorhabditis elegans, GI17554702, Length=311, Percent_Identity=44.0514469453376, Blast_Score=282, Evalue=2e-76, Organism=Caenorhabditis elegans, GI71989924, Length=311, Percent_Identity=44.0514469453376, Blast_Score=281, Evalue=3e-76, Organism=Caenorhabditis elegans, GI17554704, Length=309, Percent_Identity=44.0129449838188, Blast_Score=281, Evalue=4e-76, Organism=Caenorhabditis elegans, GI17570245, Length=339, Percent_Identity=34.5132743362832, Blast_Score=192, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6321776, Length=310, Percent_Identity=44.1935483870968, Blast_Score=266, Evalue=3e-72, Organism=Saccharomyces cerevisiae, GI6320946, Length=311, Percent_Identity=43.7299035369775, Blast_Score=264, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6319403, Length=312, Percent_Identity=44.8717948717949, Blast_Score=260, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6322667, Length=196, Percent_Identity=42.3469387755102, Blast_Score=159, Evalue=7e-40, Organism=Saccharomyces cerevisiae, GI6324511, Length=86, Percent_Identity=43.0232558139535, Blast_Score=80, Evalue=5e-16, Organism=Drosophila melanogaster, GI21355239, Length=311, Percent_Identity=45.3376205787781, Blast_Score=283, Evalue=1e-76, Organism=Drosophila melanogaster, GI45551540, Length=334, Percent_Identity=42.2155688622754, Blast_Score=270, Evalue=8e-73, Organism=Drosophila melanogaster, GI281362873, Length=351, Percent_Identity=31.6239316239316, Blast_Score=178, Evalue=3e-45, Organism=Drosophila melanogaster, GI24651454, Length=351, Percent_Identity=31.6239316239316, Blast_Score=178, Evalue=3e-45, Organism=Drosophila melanogaster, GI24651458, Length=351, Percent_Identity=31.6239316239316, Blast_Score=178, Evalue=4e-45, Organism=Drosophila melanogaster, GI24651456, Length=351, Percent_Identity=31.6239316239316, Blast_Score=178, Evalue=4e-45, Organism=Drosophila melanogaster, GI45552010, Length=370, Percent_Identity=31.0810810810811, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI24651462, Length=370, Percent_Identity=31.0810810810811, Blast_Score=171, Evalue=4e-43, Organism=Drosophila melanogaster, GI24651464, Length=370, Percent_Identity=31.0810810810811, Blast_Score=171, Evalue=4e-43,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 33532; Mature: 33532
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFAGNSNRVLAEAIARYLNISLGKAMVRRFADQEIFVEIQENVRGEDVFVLQSTSYPA CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHCCCCCEEEEEECCCCCC NDHLMELLIMIDAFRRSSARRITAVLPYFGYARQDRRTSGRTPISAKLVANLITQAGADR HHHHHHHHHHHHHHHCCCCHHEEEEHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCE VLTLDLHAGQIQGFFDIPTDNLYAVPVMARDVKAHYKLENVMVVSPDVGGVVRARALAKR EEEEEECCCCCCEEEECCCCCEEEEEEHHHHHHHHEEECEEEEECCCCCHHHHHHHHHHH IDAPLAIVDKRRDRPGESEVMNVIGDVHGRDCLLIDDIVDSGGTLCNAAEALIANGATSV HCCCEEEHHCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHCCCCCHHHHHHHHHHCCCCHH TAYITHGVLSGGAVARITGSKLKELVITDSIQPTSSVEAAHNIRAITIADLIGEAISRTA HHHHHHHHHCCCCEEEECHHHHHHHHEECCCCCCCHHHHHHCEEEEHHHHHHHHHHHHCC SEESVSSLFN CHHHHHHHCC >Mature Secondary Structure MKLFAGNSNRVLAEAIARYLNISLGKAMVRRFADQEIFVEIQENVRGEDVFVLQSTSYPA CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHCCCCCEEEEEECCCCCC NDHLMELLIMIDAFRRSSARRITAVLPYFGYARQDRRTSGRTPISAKLVANLITQAGADR HHHHHHHHHHHHHHHCCCCHHEEEEHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCE VLTLDLHAGQIQGFFDIPTDNLYAVPVMARDVKAHYKLENVMVVSPDVGGVVRARALAKR EEEEEECCCCCCEEEECCCCCEEEEEEHHHHHHHHEEECEEEEECCCCCHHHHHHHHHHH IDAPLAIVDKRRDRPGESEVMNVIGDVHGRDCLLIDDIVDSGGTLCNAAEALIANGATSV HCCCEEEHHCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHCCCCCHHHHHHHHHHCCCCHH TAYITHGVLSGGAVARITGSKLKELVITDSIQPTSSVEAAHNIRAITIADLIGEAISRTA HHHHHHHHHCCCCEEEECHHHHHHHHEECCCCCCCHHHHHHCEEEEHHHHHHHHHHHHCC SEESVSSLFN CHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]