| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634497
Identifier: 110634497
GI number: 110634497
Start: 2299993
End: 2300493
Strand: Reverse
Name: 110634497
Synonym: Meso_2148
Alternate gene names: NA
Gene position: 2300493-2299993 (Counterclockwise)
Preceding gene: 110634498
Following gene: 110634496
Centisome position: 52.14
GC content: 58.88
Gene sequence:
>501_bases ATGAGCCTTCTTGAATTCGACATGACCCGTGGCGCCCATCCTGTGGACGTTATCGAGCATGTCGCCCACTCGAACGACTG GAGCTTCGAGCGCAATGGCGACGACGAAATCGCCATTGCCGTGGCCGGCACCTGGACGGATTATCACGTCTCCTTTTCCT GGATGGAAGAGTTCGAGGCCCTTCACGTTGCCTGCGCGTTCGATCTGAAGGTGCCGGAGAAGCGGACGCTAGAGGTCATG CGGCTCATCTCCCTCATCAACGAACAGATGTTGTTCGGCCATTTCGACCTGTGGGAGCGCGAGGGTGTCGTCATGTTTCG CCAATCGCTGGTGCTCGCCGGCGGGCTGGAACCGACGGGCCAGCAGGTCGAGGTAATGCTCAACAGCGCCCTTGAAGCCT GCGAATGCTACTATCAGGCTTTCCAATATGTCATCTGGTCCGGCACGAGTGCTCAGGACGCGCTGAACAGCGTGCTGTTC GAAACCTTCGGCACCGCCTGA
Upstream 100 bases:
>100_bases TCACGCTCCGCTCAAGTGTCGTACTCGGTCGCGTGCCTGAACCGCATGTGTCACATGGCGGGCGTCTGACGGCGCTCCCG AAGAATGGGAAAGCAGATTT
Downstream 100 bases:
>100_bases GAGAAGCGATGAAGCGGGCGCCTGAGATCGCCTACGCCGATTTCGAAAAGGTCGATATCCGTGTTGGCACGGTTGTCGAG GCCGAGTCGTTCCCCGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSLLEFDMTRGAHPVDVIEHVAHSNDWSFERNGDDEIAIAVAGTWTDYHVSFSWMEEFEALHVACAFDLKVPEKRTLEVM RLISLINEQMLFGHFDLWEREGVVMFRQSLVLAGGLEPTGQQVEVMLNSALEACECYYQAFQYVIWSGTSAQDALNSVLF ETFGTA
Sequences:
>Translated_166_residues MSLLEFDMTRGAHPVDVIEHVAHSNDWSFERNGDDEIAIAVAGTWTDYHVSFSWMEEFEALHVACAFDLKVPEKRTLEVM RLISLINEQMLFGHFDLWEREGVVMFRQSLVLAGGLEPTGQQVEVMLNSALEACECYYQAFQYVIWSGTSAQDALNSVLF ETFGTA >Mature_165_residues SLLEFDMTRGAHPVDVIEHVAHSNDWSFERNGDDEIAIAVAGTWTDYHVSFSWMEEFEALHVACAFDLKVPEKRTLEVMR LISLINEQMLFGHFDLWEREGVVMFRQSLVLAGGLEPTGQQVEVMLNSALEACECYYQAFQYVIWSGTSAQDALNSVLFE TFGTA
Specific function: Unknown
COG id: COG5465
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18834; Mature: 18703
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLEFDMTRGAHPVDVIEHVAHSNDWSFERNGDDEIAIAVAGTWTDYHVSFSWMEEFEA CCCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCEEEEEEHHHHHHHHH LHVACAFDLKVPEKRTLEVMRLISLINEQMLFGHFDLWEREGVVMFRQSLVLAGGLEPTG HHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHCCCCCCC QQVEVMLNSALEACECYYQAFQYVIWSGTSAQDALNSVLFETFGTA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SLLEFDMTRGAHPVDVIEHVAHSNDWSFERNGDDEIAIAVAGTWTDYHVSFSWMEEFEA CCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCEEEEEEHHHHHHHHH LHVACAFDLKVPEKRTLEVMRLISLINEQMLFGHFDLWEREGVVMFRQSLVLAGGLEPTG HHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHCCCCCCC QQVEVMLNSALEACECYYQAFQYVIWSGTSAQDALNSVLFETFGTA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA