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The map label for this gene is petR [H]

Identifier: 110634491

GI number: 110634491

Start: 2295298

End: 2296020

Strand: Direct

Name: petR [H]

Synonym: Meso_2142

Alternate gene names: 110634491

Gene position: 2295298-2296020 (Clockwise)

Preceding gene: 110634490

Following gene: 110634492

Centisome position: 52.02

GC content: 61.83

Gene sequence:

>723_bases
ATGATTACCCGTGAGGACATCGTTGCCGAGGTGAATGCGCCGGCGGACGATGCGCCGCATCTCCTCGTCGTTGACGATGA
CACGCGCATTCGCACGCTGCTCAAGCGTTTCCTAACCGAAGAAGGGTTTCGGGTGACGGTGGCGGCAAATGCCGCCGAAG
CGCGCCGAAAGCTTGCCGGCCTGGATTTCGACCTCCTCGTCCTTGACGTCATGATGCCGGGTGAGGACGGCGTGGGGCTG
ACGCGCAGCCTCCGTCAGGAACGTGACGTGCCAATTCTTATGCTGACGGCGCTTTCCGAAACCGAAAGCCGCGTGACGGG
CTTGCAAGCGGGCGCCGACGATTATCTGCCAAAGCCGTTCGACCCGCGTGAACTCGTGCTGCGCGTCAACAATATCCTTC
GCCGTGGTGGACAGCCGACCACGCCGAAGCTGGAGCAGATTGTCTTCGGTCCCTACACCTTCCAGATCACCAGGCGAGAG
CTGAAACGCGCCGGCGAGCTATTGAAACTGACCGAACGCGAGCGTGAAATCATGGCCATCTTTGCCGAGCGCGCAGGCGA
GACCATTCCACGCCACGAGCTGGTGGGCGAGGATTCGGAGGTGGGCGAACGCACGATCGACGTGCAGATCAACCGGCTGC
GCCGCAAGATCGAGCGCGATCCCGCCAACCCGATCTGGCTGCAGACCGTACGCGGAATCGGCTATCGCCTGAGCATTGAG
TAA

Upstream 100 bases:

>100_bases
AAGTGGAGCGGTTCCTTAGAGCGATGGTGAATCCGGAGCTGCGTGCACAGCTCGACCGGTCTCACTCCAGCAGCGGCACG
GGCGAGGGAGGAACCTAGCC

Downstream 100 bases:

>100_bases
GCGGGCCCAGTGCGCGTTCGGCTTGCCGAACACAGCGCCCTCCCGCCCTTGAAAGCCGAAGAAAAAGCACCCAGATTTTT
TAAGCCGTTGCCTCGCGGGA

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MITREDIVAEVNAPADDAPHLLVVDDDTRIRTLLKRFLTEEGFRVTVAANAAEARRKLAGLDFDLLVLDVMMPGEDGVGL
TRSLRQERDVPILMLTALSETESRVTGLQAGADDYLPKPFDPRELVLRVNNILRRGGQPTTPKLEQIVFGPYTFQITRRE
LKRAGELLKLTEREREIMAIFAERAGETIPRHELVGEDSEVGERTIDVQINRLRRKIERDPANPIWLQTVRGIGYRLSIE

Sequences:

>Translated_240_residues
MITREDIVAEVNAPADDAPHLLVVDDDTRIRTLLKRFLTEEGFRVTVAANAAEARRKLAGLDFDLLVLDVMMPGEDGVGL
TRSLRQERDVPILMLTALSETESRVTGLQAGADDYLPKPFDPRELVLRVNNILRRGGQPTTPKLEQIVFGPYTFQITRRE
LKRAGELLKLTEREREIMAIFAERAGETIPRHELVGEDSEVGERTIDVQINRLRRKIERDPANPIWLQTVRGIGYRLSIE
>Mature_240_residues
MITREDIVAEVNAPADDAPHLLVVDDDTRIRTLLKRFLTEEGFRVTVAANAAEARRKLAGLDFDLLVLDVMMPGEDGVGL
TRSLRQERDVPILMLTALSETESRVTGLQAGADDYLPKPFDPRELVLRVNNILRRGGQPTTPKLEQIVFGPYTFQITRRE
LKRAGELLKLTEREREIMAIFAERAGETIPRHELVGEDSEVGERTIDVQINRLRRKIERDPANPIWLQTVRGIGYRLSIE

Specific function: Necessary for photosynthetic and respiratory growth. Probable promoter-specific protein mediating the interaction between DNA and RNA polymerase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=224, Percent_Identity=45.5357142857143, Blast_Score=186, Evalue=1e-48,
Organism=Escherichia coli, GI1790863, Length=231, Percent_Identity=34.6320346320346, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=37.0535714285714, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1787229, Length=231, Percent_Identity=36.3636363636364, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI2367329, Length=231, Percent_Identity=39.3939393939394, Blast_Score=127, Evalue=6e-31,
Organism=Escherichia coli, GI1788394, Length=225, Percent_Identity=33.7777777777778, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1786599, Length=227, Percent_Identity=34.8017621145374, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI87082012, Length=222, Percent_Identity=31.0810810810811, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1786911, Length=224, Percent_Identity=33.4821428571429, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1787375, Length=220, Percent_Identity=35, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1790552, Length=222, Percent_Identity=32.4324324324324, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1789402, Length=223, Percent_Identity=31.390134529148, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI145693140, Length=228, Percent_Identity=29.8245614035088, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=32.8828828828829, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1790299, Length=134, Percent_Identity=38.0597014925373, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788550, Length=115, Percent_Identity=34.7826086956522, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1788191, Length=127, Percent_Identity=33.0708661417323, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1790437, Length=102, Percent_Identity=36.2745098039216, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27204; Mature: 27204

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITREDIVAEVNAPADDAPHLLVVDDDTRIRTLLKRFLTEEGFRVTVAANAAEARRKLAG
CCCHHHHHEECCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHC
LDFDLLVLDVMMPGEDGVGLTRSLRQERDVPILMLTALSETESRVTGLQAGADDYLPKPF
CCHHHEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCC
DPRELVLRVNNILRRGGQPTTPKLEQIVFGPYTFQITRRELKRAGELLKLTEREREIMAI
CHHHHHHHHHHHHHCCCCCCCCHHHHEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
FAERAGETIPRHELVGEDSEVGERTIDVQINRLRRKIERDPANPIWLQTVRGIGYRLSIE
HHHHHCCCCCCHHHCCCCHHHCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEC
>Mature Secondary Structure
MITREDIVAEVNAPADDAPHLLVVDDDTRIRTLLKRFLTEEGFRVTVAANAAEARRKLAG
CCCHHHHHEECCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHC
LDFDLLVLDVMMPGEDGVGLTRSLRQERDVPILMLTALSETESRVTGLQAGADDYLPKPF
CCHHHEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCC
DPRELVLRVNNILRRGGQPTTPKLEQIVFGPYTFQITRRELKRAGELLKLTEREREIMAI
CHHHHHHHHHHHHHCCCCCCCCHHHHEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
FAERAGETIPRHELVGEDSEVGERTIDVQINRLRRKIERDPANPIWLQTVRGIGYRLSIE
HHHHHCCCCCCHHHCCCCHHHCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1323023 [H]