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The map label for this gene is ypfJ [H]

Identifier: 110634436

GI number: 110634436

Start: 2239226

End: 2240095

Strand: Reverse

Name: ypfJ [H]

Synonym: Meso_2086

Alternate gene names: 110634436

Gene position: 2240095-2239226 (Counterclockwise)

Preceding gene: 110634438

Following gene: 110634435

Centisome position: 50.77

GC content: 62.76

Gene sequence:

>870_bases
ATGCGCTGGAGGGGCCGCCGCCAAAGCAGCAATATCGAAGATCGTCGGGGGGCCGGTGGCATGCGGCGGGGCGGACCCAT
CCGCTTGCCGGTCGGTGGCCGGGCTGGCGGCGGCGGGATCGGCACGATCATTATCCTCGTCATTCTCTTCTTCGGGCTGA
GGGCGCTCGGCATCGACCCGCTGCAGATGCTGGAGCAGGGAACGGGACAGGTGACGACGCAGCAGGCCGGCAATGACGAA
GCAAGGCAATTCGTCGGCGTGGTGCTTGCCGACACCGAGGATGTGTGGGGCCAGATCTTCCAATCGGAAGGAGCCGATTA
TGAGGAGCCGCCGCTTGTGCTTTTTTCAAGCCAGGTGAATTCGGCCTGCGGCTTCGCATCGGCCGCGAGCGGGCCGTTCT
ACTGCCCCGGAGACCGGAAGGTCTATCTCGATCTCAGCTTCTTTAACGAGCTTGCAAGGCGCTTCGATGCGGCCGGCGAC
TTCGCCCAGGCCTATGTGATTGCCCATGAGGTGGGGCATCATGTGCAGAACCTGACGGGCGTTTTGCCCCGCTTCAACCG
TATGCGCGCCAATCTCAGCGAGGGGGAGGCCAATGCCATGTCGGTGCGCGTAGAGCTCCAGGCCGATTGTTATGCCGGGG
TTTGGGCCTATCACACCAACCAGCAGGGCCTTCTGGAACAGGGCGACATCGAGGAGGCGCTGAATGCCGCCTTTCAGATT
GGCGACGACACGCTGCAAAGGCGCACCCAGGGATATGTGGTGCCGGAGAGCTTCAATCACGGCACGTCGGAACAGCGGAG
CCGGTGGTTCAGGCGCGGATTCGAAAGCGGCAATCCCACGGATTGCGATACGTTCAATGGGCCCATCTGA

Upstream 100 bases:

>100_bases
AGTACTTCCATTAATCTTTCATTCGCCGTAGACCATTATCGAAATGCCTCTATATGCCCATGGCGCCAGGGGCCGGATCG
CGAAACGGAGAAAATTGCGC

Downstream 100 bases:

>100_bases
GTTTGTGGCGGCTGTTGATTTTGGCTGATCTTATGGGGGAATCGAAATGGTGAGGCCTGGCACGATCGCCGCCGTCCTGA
CGTCGCTTGCCGCCGGCATG

Product: protein of unknown function, zinc metallopeptidase putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MRWRGRRQSSNIEDRRGAGGMRRGGPIRLPVGGRAGGGGIGTIIILVILFFGLRALGIDPLQMLEQGTGQVTTQQAGNDE
ARQFVGVVLADTEDVWGQIFQSEGADYEEPPLVLFSSQVNSACGFASAASGPFYCPGDRKVYLDLSFFNELARRFDAAGD
FAQAYVIAHEVGHHVQNLTGVLPRFNRMRANLSEGEANAMSVRVELQADCYAGVWAYHTNQQGLLEQGDIEEALNAAFQI
GDDTLQRRTQGYVVPESFNHGTSEQRSRWFRRGFESGNPTDCDTFNGPI

Sequences:

>Translated_289_residues
MRWRGRRQSSNIEDRRGAGGMRRGGPIRLPVGGRAGGGGIGTIIILVILFFGLRALGIDPLQMLEQGTGQVTTQQAGNDE
ARQFVGVVLADTEDVWGQIFQSEGADYEEPPLVLFSSQVNSACGFASAASGPFYCPGDRKVYLDLSFFNELARRFDAAGD
FAQAYVIAHEVGHHVQNLTGVLPRFNRMRANLSEGEANAMSVRVELQADCYAGVWAYHTNQQGLLEQGDIEEALNAAFQI
GDDTLQRRTQGYVVPESFNHGTSEQRSRWFRRGFESGNPTDCDTFNGPI
>Mature_289_residues
MRWRGRRQSSNIEDRRGAGGMRRGGPIRLPVGGRAGGGGIGTIIILVILFFGLRALGIDPLQMLEQGTGQVTTQQAGNDE
ARQFVGVVLADTEDVWGQIFQSEGADYEEPPLVLFSSQVNSACGFASAASGPFYCPGDRKVYLDLSFFNELARRFDAAGD
FAQAYVIAHEVGHHVQNLTGVLPRFNRMRANLSEGEANAMSVRVELQADCYAGVWAYHTNQQGLLEQGDIEEALNAAFQI
GDDTLQRRTQGYVVPESFNHGTSEQRSRWFRRGFESGNPTDCDTFNGPI

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=298, Percent_Identity=49.3288590604027, Blast_Score=293, Evalue=6e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 31684; Mature: 31684

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWRGRRQSSNIEDRRGAGGMRRGGPIRLPVGGRAGGGGIGTIIILVILFFGLRALGIDP
CCCCCCCCCCCCCHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCH
LQMLEQGTGQVTTQQAGNDEARQFVGVVLADTEDVWGQIFQSEGADYEEPPLVLFSSQVN
HHHHHCCCCCEEECCCCCHHHHHHHHHHEECCHHHHHHHHHHCCCCCCCCCEEEEECCCC
SACGFASAASGPFYCPGDRKVYLDLSFFNELARRFDAAGDFAQAYVIAHEVGHHVQNLTG
CCCCCCCCCCCCEECCCCCEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VLPRFNRMRANLSEGEANAMSVRVELQADCYAGVWAYHTNQQGLLEQGDIEEALNAAFQI
HHHHHHHHHCCCCCCCCCEEEEEEEEECCCEECEEEEECCCCCCCCCCCHHHHHHHHHHC
GDDTLQRRTQGYVVPESFNHGTSEQRSRWFRRGFESGNPTDCDTFNGPI
CHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRWRGRRQSSNIEDRRGAGGMRRGGPIRLPVGGRAGGGGIGTIIILVILFFGLRALGIDP
CCCCCCCCCCCCCHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCH
LQMLEQGTGQVTTQQAGNDEARQFVGVVLADTEDVWGQIFQSEGADYEEPPLVLFSSQVN
HHHHHCCCCCEEECCCCCHHHHHHHHHHEECCHHHHHHHHHHCCCCCCCCCEEEEECCCC
SACGFASAASGPFYCPGDRKVYLDLSFFNELARRFDAAGDFAQAYVIAHEVGHHVQNLTG
CCCCCCCCCCCCEECCCCCEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VLPRFNRMRANLSEGEANAMSVRVELQADCYAGVWAYHTNQQGLLEQGDIEEALNAAFQI
HHHHHHHHHCCCCCCCCCEEEEEEEEECCCEECEEEEECCCCCCCCCCCHHHHHHHHHHC
GDDTLQRRTQGYVVPESFNHGTSEQRSRWFRRGFESGNPTDCDTFNGPI
CHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]