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The map label for this gene is yfbS [C]

Identifier: 110634431

GI number: 110634431

Start: 2233031

End: 2234812

Strand: Direct

Name: yfbS [C]

Synonym: Meso_2081

Alternate gene names: 110634431

Gene position: 2233031-2234812 (Clockwise)

Preceding gene: 110634430

Following gene: 110634433

Centisome position: 50.61

GC content: 63.58

Gene sequence:

>1782_bases
ATGCTTACGTTGCCGCAGATCCTCTCCTTCACGGTGATCGGCCTGGCCATGGCGGCCTTCATATGGGGCCGCTTCCGCTA
TGACCTTGTCGGCGCGCTCGCCCTCCTGGCGGGCGTTGCGGTCGGCATCGTGCCGGTCGATCGCGCCTTCAGCGGCTTCA
GCGACGACATCGTCATCATTGTCGGCAGCGCGCTCCTGGTCAGCGCGGCGGTGGCGCGCAGCGGCATCCTTGAACTGACC
ATCCACCGCTATGCACCAACAGTAACGTCGGTGCGCGCTCAGGTGGCGCTGCTGGTGCTCACCGTCGCCTTCATGTCGGC
TTTCGTGAAAAATATCGGGGCGCTGGCGATCATGATCCCGGTCGCGTTCCAATTCGCGCGGCGCTCGAATACCAGCGCTT
CCACTTTCCTGATGCCGATGGCCTTTGCGTCCCTGCTGGGCGGGCTGATGACCCAGATCGGCACCTCACCCAACATCCTG
GTATCCCGCCTGCGCGGCGACATCACCGGCACGCCTTTCACGATGTTCGATTTCACGCCGGTGGGCTTCGCGCTCACCAT
CGCGGGTTCCATTTTTCTCATTCTATTCTATTGGCTCCTGCCGACGCGTGAGCGCAAGGACAGCTCTCTCCAGGAAGCGA
TCGTCATCAAGAATTACGTGGCCGAAGCCCGGGTGGCGAAGGAATCCACGGTGGTCAACAAGACGCTTGGCGACCTCCTC
AAGATCTCGGCCGGGGACGTTGCCATCACAAACGTCCTGCGCGCCGACGGCCTGCGCATTGCGCCGCTGCCGGATGCGGT
GCTGCGCGACGGCGATATCCTGCTCATGGAAGGCGAGCACGAAGCGCTCGATCGCCTCATCGCCCAGGCCAAGCTGAAGA
TTTCGAGTGACAGGGACGTGGCAAATGGCGGTGATCCCGCCTTCGAGGTCACGGCCATCGAGGCTGTCGTCGGCGAAAAC
TCAAATCTCATCGGCTGGTCGGCCCAGTCGCTCCTGCTCTACGACCGGTTCAATGTGAATCTGCTAGCGGTGAGCCGCCA
GGGCGAGCGCCTCAACCAGCGCGTGGGCACGATCACCCTGCGCCTTGGCGATGTGGTCGTGCTTCAGGGCAACCAGAAGT
CCCTGCCGGAGTTCCTGCGCGATTTCGGTTTGCTGCCGTTGGCCGAGCGCCCCCTGCTGCTGGGCAGTGTGCGGCGTGGT
GTGGTCCCCCTTCTCATCCTGTTTGCCGCCATCGGCGCCACCGCCATCGGCGCTGTGCCCGTGCATCTCGCCTTCTTCAC
GGCCGCCGTAATGATGGTGCTTTTCCGCGTCATCCCCGTGCGCAATGTATATAGCGCGATCGACGGTCCCATCCTGGTGA
TGCTTGCCACACTCATCCCTGTCAGCGATACGCTGCGCGCCACGGGCGCGACCGACATCATAGCCTCGAATCTTGCAGGT
ATCGGCGCGCTTCTGCCCAGCTACGGCGCTCTGGCGCTCATCATGGTGGCGGCCATGGCGGTCACCCCGTTCCTCAACAA
CGCCGCGACGGTGCTCGTAATGGCGCCGATTGCCGCCGGCTTCGCCACCACCCTCGGCTACAGGCCGGAAGCTTTCCTGA
TGGCCATCGCCATCGGCGCCGGTTGCGACTTCCTCACCCCCATCGGCCATCAGTGCAATACACTGGTCATGGGTCCCGGC
GGCTACCGCTTCTCCGACTATCCGCGGCTCGGCCTTCCCCTCTCGATCATCGTTATTCTGGTCGCGGTGCCGACGCTGAT
GGTGGTCTGGCCGCTGCAATAG

Upstream 100 bases:

>100_bases
GTTCGAGCGGACAGATGCGCAGTTTTTTATTAAACGGTATTTGCGGCGGCAGAAACGAAATGACACATGCTGGTTCCATG
GCTCATCGACAAAGCTTCTG

Downstream 100 bases:

>100_bases
AGGATCGGCGCACCAACCATGCACCCGTGGGATGGGCAGGCGGATTCCCTGCCCTCGAATCTACTGGAGCATGCCTTTGA
CGATGCCGCTCGCCTTGCCC

Product: TrkA-C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MLTLPQILSFTVIGLAMAAFIWGRFRYDLVGALALLAGVAVGIVPVDRAFSGFSDDIVIIVGSALLVSAAVARSGILELT
IHRYAPTVTSVRAQVALLVLTVAFMSAFVKNIGALAIMIPVAFQFARRSNTSASTFLMPMAFASLLGGLMTQIGTSPNIL
VSRLRGDITGTPFTMFDFTPVGFALTIAGSIFLILFYWLLPTRERKDSSLQEAIVIKNYVAEARVAKESTVVNKTLGDLL
KISAGDVAITNVLRADGLRIAPLPDAVLRDGDILLMEGEHEALDRLIAQAKLKISSDRDVANGGDPAFEVTAIEAVVGEN
SNLIGWSAQSLLLYDRFNVNLLAVSRQGERLNQRVGTITLRLGDVVVLQGNQKSLPEFLRDFGLLPLAERPLLLGSVRRG
VVPLLILFAAIGATAIGAVPVHLAFFTAAVMMVLFRVIPVRNVYSAIDGPILVMLATLIPVSDTLRATGATDIIASNLAG
IGALLPSYGALALIMVAAMAVTPFLNNAATVLVMAPIAAGFATTLGYRPEAFLMAIAIGAGCDFLTPIGHQCNTLVMGPG
GYRFSDYPRLGLPLSIIVILVAVPTLMVVWPLQ

Sequences:

>Translated_593_residues
MLTLPQILSFTVIGLAMAAFIWGRFRYDLVGALALLAGVAVGIVPVDRAFSGFSDDIVIIVGSALLVSAAVARSGILELT
IHRYAPTVTSVRAQVALLVLTVAFMSAFVKNIGALAIMIPVAFQFARRSNTSASTFLMPMAFASLLGGLMTQIGTSPNIL
VSRLRGDITGTPFTMFDFTPVGFALTIAGSIFLILFYWLLPTRERKDSSLQEAIVIKNYVAEARVAKESTVVNKTLGDLL
KISAGDVAITNVLRADGLRIAPLPDAVLRDGDILLMEGEHEALDRLIAQAKLKISSDRDVANGGDPAFEVTAIEAVVGEN
SNLIGWSAQSLLLYDRFNVNLLAVSRQGERLNQRVGTITLRLGDVVVLQGNQKSLPEFLRDFGLLPLAERPLLLGSVRRG
VVPLLILFAAIGATAIGAVPVHLAFFTAAVMMVLFRVIPVRNVYSAIDGPILVMLATLIPVSDTLRATGATDIIASNLAG
IGALLPSYGALALIMVAAMAVTPFLNNAATVLVMAPIAAGFATTLGYRPEAFLMAIAIGAGCDFLTPIGHQCNTLVMGPG
GYRFSDYPRLGLPLSIIVILVAVPTLMVVWPLQ
>Mature_593_residues
MLTLPQILSFTVIGLAMAAFIWGRFRYDLVGALALLAGVAVGIVPVDRAFSGFSDDIVIIVGSALLVSAAVARSGILELT
IHRYAPTVTSVRAQVALLVLTVAFMSAFVKNIGALAIMIPVAFQFARRSNTSASTFLMPMAFASLLGGLMTQIGTSPNIL
VSRLRGDITGTPFTMFDFTPVGFALTIAGSIFLILFYWLLPTRERKDSSLQEAIVIKNYVAEARVAKESTVVNKTLGDLL
KISAGDVAITNVLRADGLRIAPLPDAVLRDGDILLMEGEHEALDRLIAQAKLKISSDRDVANGGDPAFEVTAIEAVVGEN
SNLIGWSAQSLLLYDRFNVNLLAVSRQGERLNQRVGTITLRLGDVVVLQGNQKSLPEFLRDFGLLPLAERPLLLGSVRRG
VVPLLILFAAIGATAIGAVPVHLAFFTAAVMMVLFRVIPVRNVYSAIDGPILVMLATLIPVSDTLRATGATDIIASNLAG
IGALLPSYGALALIMVAAMAVTPFLNNAATVLVMAPIAAGFATTLGYRPEAFLMAIAIGAGCDFLTPIGHQCNTLVMGPG
GYRFSDYPRLGLPLSIIVILVAVPTLMVVWPLQ

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=610, Percent_Identity=28.3606557377049, Blast_Score=197, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 62907; Mature: 62907

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLPQILSFTVIGLAMAAFIWGRFRYDLVGALALLAGVAVGIVPVDRAFSGFSDDIVII
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCEEEE
VGSALLVSAAVARSGILELTIHRYAPTVTSVRAQVALLVLTVAFMSAFVKNIGALAIMIP
ECHHHHHHHHHHHCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAFQFARRSNTSASTFLMPMAFASLLGGLMTQIGTSPNILVSRLRGDITGTPFTMFDFTP
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEECCC
VGFALTIAGSIFLILFYWLLPTRERKDSSLQEAIVIKNYVAEARVAKESTVVNKTLGDLL
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KISAGDVAITNVLRADGLRIAPLPDAVLRDGDILLMEGEHEALDRLIAQAKLKISSDRDV
HCCCCCHHHHHHHHHCCEEECCCCHHHHCCCCEEEECCCHHHHHHHHHHHHHEECCCCCC
ANGGDPAFEVTAIEAVVGENSNLIGWSAQSLLLYDRFNVNLLAVSRQGERLNQRVGTITL
CCCCCCCEEEEEEHHHHCCCCCEEEECCCEEEEEEECCEEEEEEECCCHHHHHHHCEEEE
RLGDVVVLQGNQKSLPEFLRDFGLLPLAERPLLLGSVRRGVVPLLILFAAIGATAIGAVP
EECCEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHLAFFTAAVMMVLFRVIPVRNVYSAIDGPILVMLATLIPVSDTLRATGATDIIASNLAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHH
IGALLPSYGALALIMVAAMAVTPFLNNAATVLVMAPIAAGFATTLGYRPEAFLMAIAIGA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHC
GCDFLTPIGHQCNTLVMGPGGYRFSDYPRLGLPLSIIVILVAVPTLMVVWPLQ
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCC
>Mature Secondary Structure
MLTLPQILSFTVIGLAMAAFIWGRFRYDLVGALALLAGVAVGIVPVDRAFSGFSDDIVII
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCEEEE
VGSALLVSAAVARSGILELTIHRYAPTVTSVRAQVALLVLTVAFMSAFVKNIGALAIMIP
ECHHHHHHHHHHHCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAFQFARRSNTSASTFLMPMAFASLLGGLMTQIGTSPNILVSRLRGDITGTPFTMFDFTP
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEECCC
VGFALTIAGSIFLILFYWLLPTRERKDSSLQEAIVIKNYVAEARVAKESTVVNKTLGDLL
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KISAGDVAITNVLRADGLRIAPLPDAVLRDGDILLMEGEHEALDRLIAQAKLKISSDRDV
HCCCCCHHHHHHHHHCCEEECCCCHHHHCCCCEEEECCCHHHHHHHHHHHHHEECCCCCC
ANGGDPAFEVTAIEAVVGENSNLIGWSAQSLLLYDRFNVNLLAVSRQGERLNQRVGTITL
CCCCCCCEEEEEEHHHHCCCCCEEEECCCEEEEEEECCEEEEEEECCCHHHHHHHCEEEE
RLGDVVVLQGNQKSLPEFLRDFGLLPLAERPLLLGSVRRGVVPLLILFAAIGATAIGAVP
EECCEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHLAFFTAAVMMVLFRVIPVRNVYSAIDGPILVMLATLIPVSDTLRATGATDIIASNLAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHH
IGALLPSYGALALIMVAAMAVTPFLNNAATVLVMAPIAAGFATTLGYRPEAFLMAIAIGA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHC
GCDFLTPIGHQCNTLVMGPGGYRFSDYPRLGLPLSIIVILVAVPTLMVVWPLQ
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]