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The map label for this gene is ycgN [C]

Identifier: 110634420

GI number: 110634420

Start: 2224498

End: 2224941

Strand: Direct

Name: ycgN [C]

Synonym: Meso_2070

Alternate gene names: 110634420

Gene position: 2224498-2224941 (Clockwise)

Preceding gene: 110634418

Following gene: 110634421

Centisome position: 50.41

GC content: 62.16

Gene sequence:

>444_bases
ATGGAACCCTTCTGGAAAAACAAGCCGCTCCTGGCGATGAGCGAAGCCGAGTGGGAATCCCTCTGTGACGGCTGCGGCAA
ATGCTGCCTTGCCAAGCTGGAGGATGAGGATACCGGCGAGATTCACTGGACCAGCGTAGCCTGCCGCCTGTTCGACGCCG
GCACGTGCCGCTGCACCGATTATGCGGGCCGGCTCGCGCGCGTTCCCGACTGCGTGCGCCTCACTCCCGCAAATGTCGGC
GAGATCACCTGGCTTCCCTCCACCTGCGCCTACCGGCTGCTGGCGGAAGGGAAGGATCTTCCCTGGTGGCATCCGCTCGT
CTCGGGCCGGGCGGAAACGGTACACGAGGCTGGAATATCCATGCGTAACCGTGTCAGCGCGCTGGAGGACCAGCTTGCAG
ACGTGGAAGAATATTTTCAGCATCTTCTGGAGGAAGAGCCATGA

Upstream 100 bases:

>100_bases
CAGGGGTAAATCTGCGATTTCCCGCTTGGTTCCCGGAAGCGGCAGAAAGAAGGCCATTGCGCGCTTGACCTTCGTCGTCC
ACAGGGCCACATCGAAAGCG

Downstream 100 bases:

>100_bases
GCGCAACGGAAACCGGGGCCCTGATCGCCCGCGCCCTCGCAAGCTTCAACGCGCGGGACGTCGAAGCCATGATGGCCTGC
CTTTCGGAAGATGTGGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MEPFWKNKPLLAMSEAEWESLCDGCGKCCLAKLEDEDTGEIHWTSVACRLFDAGTCRCTDYAGRLARVPDCVRLTPANVG
EITWLPSTCAYRLLAEGKDLPWWHPLVSGRAETVHEAGISMRNRVSALEDQLADVEEYFQHLLEEEP

Sequences:

>Translated_147_residues
MEPFWKNKPLLAMSEAEWESLCDGCGKCCLAKLEDEDTGEIHWTSVACRLFDAGTCRCTDYAGRLARVPDCVRLTPANVG
EITWLPSTCAYRLLAEGKDLPWWHPLVSGRAETVHEAGISMRNRVSALEDQLADVEEYFQHLLEEEP
>Mature_147_residues
MEPFWKNKPLLAMSEAEWESLCDGCGKCCLAKLEDEDTGEIHWTSVACRLFDAGTCRCTDYAGRLARVPDCVRLTPANVG
EITWLPSTCAYRLLAEGKDLPWWHPLVSGRAETVHEAGISMRNRVSALEDQLADVEEYFQHLLEEEP

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family [H]

Homologues:

Organism=Escherichia coli, GI145693117, Length=137, Percent_Identity=53.2846715328467, Blast_Score=156, Evalue=7e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008228
- InterPro:   IPR005358 [H]

Pfam domain/function: PF03692 UPF0153 [H]

EC number: NA

Molecular weight: Translated: 16573; Mature: 16573

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPFWKNKPLLAMSEAEWESLCDGCGKCCLAKLEDEDTGEIHWTSVACRLFDAGTCRCTD
CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCEECH
YAGRLARVPDCVRLTPANVGEITWLPSTCAYRLLAEGKDLPWWHPLVSGRAETVHEAGIS
HHHHHHCCCCCEEECCCCCCCEEECCHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHH
MRNRVSALEDQLADVEEYFQHLLEEEP
HHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEPFWKNKPLLAMSEAEWESLCDGCGKCCLAKLEDEDTGEIHWTSVACRLFDAGTCRCTD
CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCEECH
YAGRLARVPDCVRLTPANVGEITWLPSTCAYRLLAEGKDLPWWHPLVSGRAETVHEAGIS
HHHHHHCCCCCEEECCCCCCCEEECCHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHH
MRNRVSALEDQLADVEEYFQHLLEEEP
HHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]