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The map label for this gene is yfiB [C]

Identifier: 110634419

GI number: 110634419

Start: 2222257

End: 2224368

Strand: Reverse

Name: yfiB [C]

Synonym: Meso_2069

Alternate gene names: 110634419

Gene position: 2224368-2222257 (Counterclockwise)

Preceding gene: 110634423

Following gene: 110634412

Centisome position: 50.41

GC content: 65.34

Gene sequence:

>2112_bases
ATGAAGAAGTCGAACCGGTTTTGGGCAGGGACCGCTCTATGCCTGCTGATGGCATCGCCGATCGCTGCGAAGGCCGAGAT
GCGCCTCGCCTCTGGAGTGCGCCCCAGCACGATCAATGCGCCGCTGATGTTGGCGCAGGCCGAAGAACCGGCCGGAGAAG
GCCAGGACGCCGGATGCCCGCCCGGAACCGTGGCCGCCGAAGGCGGATGCGTTCCGGAAGAGCAGGCGCCCGCCGAAGAG
GAAGAGGAGGCGCCTGCGCCTGAATCAGAGGCCCAGCCTGAGCCGGCACCGGAGCCCGAAGCGGCTCCCGAGCCTGAACC
TGAGCCTGAGGCGGCTCCCGAGCCGGAGCCTGAACCTGAGGCGGCTCCTGAGCCAGAGGCCGAGCCTGAAGCAGCTCCCG
AGGAAGCTCCTGCAGAAGAACCTCCGGTGATGGAAGAGCAGCCCGCCCAGCCGGCGGAGGAGACCGAGCCAGCCCCCGAG
GAGGCGCCGCCCGTCGAGGAAGAGGCACCGGCTGAAGAGCAGGCTCCCGCCGAGGAAGCCGCGCCCGAGGAAGAAGCGCC
TCCCGCCGCCGAGGAGCCTGCTGCCGAGGAAGCTCCGGCCGAAGAACAAGCTCCGCTAGAGGAGCAAGCGCCGGAAGAGG
AGCAGGCACCCGCGACAGAAGAGGCTCCGGCGATACAGGAAGCTCCCGCAGAAGAAGAGGCGCCTGCCACCGAGGAGGCC
CCGGCGACTGAAGAAGCCCCGGTGGAACCCGAGGCAGCACCCGCCGAGGAAGAAGCCGCGCCGATCGAGGAGGAGCAGGC
GGAACCAGAAGCGGCTCCCGAGGCGGAGCAGCCGGCGGCAGAGCCCGATGAAACTCTCGAAGACGAGCAGCCAATCGAGG
AGGAGGCGCAGCCAGGTGCCGAAGCACCGGCGGAAGATCAGGAAGCCTTGCCTGAAAACGCCGCTCCCGTGCTCGACAGC
CAGAAGGAAGCCCAGCCCGCAGGAGAGGCCGAAGAGCCTGCGCAGCAGCCTGCCGAAGGAGAGGCCGCACCCACCGATGA
GCCGCAGGAACAGGCTGAGCCCGCGCCGGATGCTGCTCCCGCGCTGATCCCCGAATCGGATGCACAGGCACAGGAAGACC
TGTTCGATCCCCAACAGGTGCAGCAGGAAATTCGCACGCTCGTCGAAGAACAGGGCCAACGGATCGAAATGGGCCAGACG
CCCGAGGACCGAAGAGTGCGCCGGCGTGAAATCTTCCAGCCGCGCGAGAATGCCCGCGTGGTCGAGGAGTATAATGACAA
CCGCACGATCATCGAGATCAACAATCAAATCTATGTAGACCGCCCCGATTACGACCGCCTCGTGCGTCGCGACGATACGG
TCTATTACGAGGAACTGCGCAACGGGCGCGTGCGCGAGGTGGTGGAGCGGCGTGACGGCACGAGGGTGATCACCGTGCGC
AATCGTTATGGCGACGTCATCCGCCGGGTGCGCGTTACGCCGGACGGACGCGAATACGTGCTCGTCTACGTGCCGGAGGA
CCGGTACGACGACGTGCTGGAATTCCGCGATCCGGGCGCCGATCTGCCTCCGCTGAGACTCACAATCCCCGTCAGCGAAT
ATATTCTCGAGGCGGAGCAGGTGGACGATCCGAACGTCTATTACACGTTCCTCGAGCAGCCTCCGGTGGAGCCCGTGCGC
CGCTTGTATTCGCTGGAGGAAGTGCGCTACTCGGCCCGCGTGCGTGACATGGTGCGGCGTATCGATCTCGACACGATCAA
CTTCGAGTTCGGCTCGGCCAGCATTGCGGAAAGCGAGATCCCGAAGCTGGAGGGTGTAGCCAACGCCATGCTTGAAGTCC
TTGAACGCAATCCGGCAGAGACCTTCCTGATTGAGGGTCATACGGACGCTGTGGGTTCGGACGTTGCGAATCTGGCGCTG
TCGGACCGCCGTGCAGACGCCGTGGCCGAAGCGCTTTCCAATGTCTTCGGTATTCCGCCGGAGAACCTGGTGACGCAGGG
CTATGGCGAGCAATACCTGAAGATCAACACTCAGGAACGTGAGCGGGAAAACCGTCGCGTCGCCATCCGGCGCATCACGC
CGCTTGTCGCGCCGGTGGCGAGCAACCGTTAG

Upstream 100 bases:

>100_bases
AGGTCAAGCGCGCAATGGCCTTCTTTCTGCCGCTTCCGGGAACCAAGCGGGAAATCGCAGATTTACCCCTGCGGAAGGGA
CGCCACCAGGAGCAAGAAGA

Downstream 100 bases:

>100_bases
CTCCTGCTCCTCTGCGGAGCCTGGGATGCTCGGCTGGTTCCCTCCCTCCGCAGGCCGGGCAGACCGTGCGGAAGCCTCGC
CAGGACCGCTGGCGAGGCTT

Product: OmpA/MotB

Products: NA

Alternate protein names: OmpA/MotB; Outer Membrane Protein OmpA/MotB Family; OmpA/MotB Domain Protein; OmpA Family Protein; Outer Membrane Protein; Outer Membrane Protein OprF; OmpA Family Membrane Protein; Outer Membrane Protein OmpA Family

Number of amino acids: Translated: 703; Mature: 703

Protein sequence:

>703_residues
MKKSNRFWAGTALCLLMASPIAAKAEMRLASGVRPSTINAPLMLAQAEEPAGEGQDAGCPPGTVAAEGGCVPEEQAPAEE
EEEAPAPESEAQPEPAPEPEAAPEPEPEPEAAPEPEPEPEAAPEPEAEPEAAPEEAPAEEPPVMEEQPAQPAEETEPAPE
EAPPVEEEAPAEEQAPAEEAAPEEEAPPAAEEPAAEEAPAEEQAPLEEQAPEEEQAPATEEAPAIQEAPAEEEAPATEEA
PATEEAPVEPEAAPAEEEAAPIEEEQAEPEAAPEAEQPAAEPDETLEDEQPIEEEAQPGAEAPAEDQEALPENAAPVLDS
QKEAQPAGEAEEPAQQPAEGEAAPTDEPQEQAEPAPDAAPALIPESDAQAQEDLFDPQQVQQEIRTLVEEQGQRIEMGQT
PEDRRVRRREIFQPRENARVVEEYNDNRTIIEINNQIYVDRPDYDRLVRRDDTVYYEELRNGRVREVVERRDGTRVITVR
NRYGDVIRRVRVTPDGREYVLVYVPEDRYDDVLEFRDPGADLPPLRLTIPVSEYILEAEQVDDPNVYYTFLEQPPVEPVR
RLYSLEEVRYSARVRDMVRRIDLDTINFEFGSASIAESEIPKLEGVANAMLEVLERNPAETFLIEGHTDAVGSDVANLAL
SDRRADAVAEALSNVFGIPPENLVTQGYGEQYLKINTQERERENRRVAIRRITPLVAPVASNR

Sequences:

>Translated_703_residues
MKKSNRFWAGTALCLLMASPIAAKAEMRLASGVRPSTINAPLMLAQAEEPAGEGQDAGCPPGTVAAEGGCVPEEQAPAEE
EEEAPAPESEAQPEPAPEPEAAPEPEPEPEAAPEPEPEPEAAPEPEAEPEAAPEEAPAEEPPVMEEQPAQPAEETEPAPE
EAPPVEEEAPAEEQAPAEEAAPEEEAPPAAEEPAAEEAPAEEQAPLEEQAPEEEQAPATEEAPAIQEAPAEEEAPATEEA
PATEEAPVEPEAAPAEEEAAPIEEEQAEPEAAPEAEQPAAEPDETLEDEQPIEEEAQPGAEAPAEDQEALPENAAPVLDS
QKEAQPAGEAEEPAQQPAEGEAAPTDEPQEQAEPAPDAAPALIPESDAQAQEDLFDPQQVQQEIRTLVEEQGQRIEMGQT
PEDRRVRRREIFQPRENARVVEEYNDNRTIIEINNQIYVDRPDYDRLVRRDDTVYYEELRNGRVREVVERRDGTRVITVR
NRYGDVIRRVRVTPDGREYVLVYVPEDRYDDVLEFRDPGADLPPLRLTIPVSEYILEAEQVDDPNVYYTFLEQPPVEPVR
RLYSLEEVRYSARVRDMVRRIDLDTINFEFGSASIAESEIPKLEGVANAMLEVLERNPAETFLIEGHTDAVGSDVANLAL
SDRRADAVAEALSNVFGIPPENLVTQGYGEQYLKINTQERERENRRVAIRRITPLVAPVASNR
>Mature_703_residues
MKKSNRFWAGTALCLLMASPIAAKAEMRLASGVRPSTINAPLMLAQAEEPAGEGQDAGCPPGTVAAEGGCVPEEQAPAEE
EEEAPAPESEAQPEPAPEPEAAPEPEPEPEAAPEPEPEPEAAPEPEAEPEAAPEEAPAEEPPVMEEQPAQPAEETEPAPE
EAPPVEEEAPAEEQAPAEEAAPEEEAPPAAEEPAAEEAPAEEQAPLEEQAPEEEQAPATEEAPAIQEAPAEEEAPATEEA
PATEEAPVEPEAAPAEEEAAPIEEEQAEPEAAPEAEQPAAEPDETLEDEQPIEEEAQPGAEAPAEDQEALPENAAPVLDS
QKEAQPAGEAEEPAQQPAEGEAAPTDEPQEQAEPAPDAAPALIPESDAQAQEDLFDPQQVQQEIRTLVEEQGQRIEMGQT
PEDRRVRRREIFQPRENARVVEEYNDNRTIIEINNQIYVDRPDYDRLVRRDDTVYYEELRNGRVREVVERRDGTRVITVR
NRYGDVIRRVRVTPDGREYVLVYVPEDRYDDVLEFRDPGADLPPLRLTIPVSEYILEAEQVDDPNVYYTFLEQPPVEPVR
RLYSLEEVRYSARVRDMVRRIDLDTINFEFGSASIAESEIPKLEGVANAMLEVLERNPAETFLIEGHTDAVGSDVANLAL
SDRRADAVAEALSNVFGIPPENLVTQGYGEQYLKINTQERERENRRVAIRRITPLVAPVASNR

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77081; Mature: 77081

Theoretical pI: Translated: 3.73; Mature: 3.73

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSNRFWAGTALCLLMASPIAAKAEMRLASGVRPSTINAPLMLAQAEEPAGEGQDAGCP
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
PGTVAAEGGCVPEEQAPAEEEEEAPAPESEAQPEPAPEPEAAPEPEPEPEAAPEPEPEPE
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAPEPEAEPEAAPEEAPAEEPPVMEEQPAQPAEETEPAPEEAPPVEEEAPAEEQAPAEEA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHCCCHHHC
APEEEAPPAAEEPAAEEAPAEEQAPLEEQAPEEEQAPATEEAPAIQEAPAEEEAPATEEA
CCCCCCCCCCCCCCCCCCCCHHCCCCHHHCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCC
PATEEAPVEPEAAPAEEEAAPIEEEQAEPEAAPEAEQPAAEPDETLEDEQPIEEEAQPGA
CCCCCCCCCCCCCCCHHHCCCCCHHHCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHCCCC
EAPAEDQEALPENAAPVLDSQKEAQPAGEAEEPAQQPAEGEAAPTDEPQEQAEPAPDAAP
CCCCCHHHHCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHCCCCCCCCC
ALIPESDAQAQEDLFDPQQVQQEIRTLVEEQGQRIEMGQTPEDRRVRRREIFQPRENARV
CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCCCHH
VEEYNDNRTIIEINNQIYVDRPDYDRLVRRDDTVYYEELRNGRVREVVERRDGTRVITVR
HHHHCCCEEEEEECCEEEEECCCHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCEEEEEC
NRYGDVIRRVRVTPDGREYVLVYVPEDRYDDVLEFRDPGADLPPLRLTIPVSEYILEAEQ
HHHHHHHHHEECCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHH
VDDPNVYYTFLEQPPVEPVRRLYSLEEVRYSARVRDMVRRIDLDTINFEFGSASIAESEI
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHC
PKLEGVANAMLEVLERNPAETFLIEGHTDAVGSDVANLALSDRRADAVAEALSNVFGIPP
HHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ENLVTQGYGEQYLKINTQERERENRRVAIRRITPLVAPVASNR
HHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKSNRFWAGTALCLLMASPIAAKAEMRLASGVRPSTINAPLMLAQAEEPAGEGQDAGCP
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
PGTVAAEGGCVPEEQAPAEEEEEAPAPESEAQPEPAPEPEAAPEPEPEPEAAPEPEPEPE
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAPEPEAEPEAAPEEAPAEEPPVMEEQPAQPAEETEPAPEEAPPVEEEAPAEEQAPAEEA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHCCCHHHC
APEEEAPPAAEEPAAEEAPAEEQAPLEEQAPEEEQAPATEEAPAIQEAPAEEEAPATEEA
CCCCCCCCCCCCCCCCCCCCHHCCCCHHHCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCC
PATEEAPVEPEAAPAEEEAAPIEEEQAEPEAAPEAEQPAAEPDETLEDEQPIEEEAQPGA
CCCCCCCCCCCCCCCHHHCCCCCHHHCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHCCCC
EAPAEDQEALPENAAPVLDSQKEAQPAGEAEEPAQQPAEGEAAPTDEPQEQAEPAPDAAP
CCCCCHHHHCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHCCCCCCCCC
ALIPESDAQAQEDLFDPQQVQQEIRTLVEEQGQRIEMGQTPEDRRVRRREIFQPRENARV
CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCCCHH
VEEYNDNRTIIEINNQIYVDRPDYDRLVRRDDTVYYEELRNGRVREVVERRDGTRVITVR
HHHHCCCEEEEEECCEEEEECCCHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCEEEEEC
NRYGDVIRRVRVTPDGREYVLVYVPEDRYDDVLEFRDPGADLPPLRLTIPVSEYILEAEQ
HHHHHHHHHEECCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHH
VDDPNVYYTFLEQPPVEPVRRLYSLEEVRYSARVRDMVRRIDLDTINFEFGSASIAESEI
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHC
PKLEGVANAMLEVLERNPAETFLIEGHTDAVGSDVANLALSDRRADAVAEALSNVFGIPP
HHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ENLVTQGYGEQYLKINTQERERENRRVAIRRITPLVAPVASNR
HHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA