Click here to switch to the map view.

The map label for this gene is ydfG [H]

Identifier: 110634403

GI number: 110634403

Start: 2204152

End: 2204616

Strand: Reverse

Name: ydfG [H]

Synonym: Meso_2053

Alternate gene names: 110634403

Gene position: 2204616-2204152 (Counterclockwise)

Preceding gene: 110634404

Following gene: 110634398

Centisome position: 49.96

GC content: 56.56

Gene sequence:

>465_bases
ATGCAACCGCGTCTTAATTTTCATCAGGCTTCTCCGGAAATCATCAAAAATGTTCGCGCGCTGAACAAGGCCGTCGACGA
GTGCGGCTTGGATAAGATGCTGCTTCATTTGATCAAGCTGCGGGCCTCGCAAATAAACGGCTGCTCCTACTGTGTTGACA
TGCATAGCCATGAGGCGCGGGAAGATGGCGAAAGTGAGCAGCGGCTTTATCTGGTGTCCGCCTGGCGCGAATCGCCACTC
TTTTCAGAGCGTGAGCGCGCGGCGCTAGCCTGGACCGAGAAGCTGACGCGGCTTGCTGACGGCTTGGTGGAGGACGAGGC
ATTCGAGGACGTGAGCAGGCATTTTACCGAGGACGAACTGGTGAAGCTCTCGGTTGCCATCGGCATGATCAATGTTTGGA
ACCGCCTCTGCGTGCCCTTCCAGAGCATCCATCCGATCAGGGAACAACGTCTCGCCGCGGAATAG

Upstream 100 bases:

>100_bases
AAGGCCGAGGCCGATCCGCGCGCGATCGCATTCAACTGCGGCTTTGTGGCCCGTCACCAGCGGCCGCAGGATAAAAAGCC
CAAATAGAAGGAAAGAATGC

Downstream 100 bases:

>100_bases
ACGCGGCCCCGCTAAGCCTTGCTGGCGGCGAAGGAAATGCCGCCGGCGAGCTCTCCGGCGATTCTGAGCGAGGCACCTGT
TGCGACCACCATTTGCGGCA

Product: alkylhydroperoxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MQPRLNFHQASPEIIKNVRALNKAVDECGLDKMLLHLIKLRASQINGCSYCVDMHSHEAREDGESEQRLYLVSAWRESPL
FSERERAALAWTEKLTRLADGLVEDEAFEDVSRHFTEDELVKLSVAIGMINVWNRLCVPFQSIHPIREQRLAAE

Sequences:

>Translated_154_residues
MQPRLNFHQASPEIIKNVRALNKAVDECGLDKMLLHLIKLRASQINGCSYCVDMHSHEAREDGESEQRLYLVSAWRESPL
FSERERAALAWTEKLTRLADGLVEDEAFEDVSRHFTEDELVKLSVAIGMINVWNRLCVPFQSIHPIREQRLAAE
>Mature_154_residues
MQPRLNFHQASPEIIKNVRALNKAVDECGLDKMLLHLIKLRASQINGCSYCVDMHSHEAREDGESEQRLYLVSAWRESPL
FSERERAALAWTEKLTRLADGLVEDEAFEDVSRHFTEDELVKLSVAIGMINVWNRLCVPFQSIHPIREQRLAAE

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788050, Length=125, Percent_Identity=32.8, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 17728; Mature: 17728

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPRLNFHQASPEIIKNVRALNKAVDECGLDKMLLHLIKLRASQINGCSYCVDMHSHEAR
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
EDGESEQRLYLVSAWRESPLFSERERAALAWTEKLTRLADGLVEDEAFEDVSRHFTEDEL
CCCCCHHEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VKLSVAIGMINVWNRLCVPFQSIHPIREQRLAAE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQPRLNFHQASPEIIKNVRALNKAVDECGLDKMLLHLIKLRASQINGCSYCVDMHSHEAR
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
EDGESEQRLYLVSAWRESPLFSERERAALAWTEKLTRLADGLVEDEAFEDVSRHFTEDEL
CCCCCHHEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VKLSVAIGMINVWNRLCVPFQSIHPIREQRLAAE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]