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The map label for this gene is amaB [H]

Identifier: 110634393

GI number: 110634393

Start: 2195054

End: 2196304

Strand: Direct

Name: amaB [H]

Synonym: Meso_2043

Alternate gene names: 110634393

Gene position: 2195054-2196304 (Clockwise)

Preceding gene: 110634392

Following gene: 110634394

Centisome position: 49.75

GC content: 63.87

Gene sequence:

>1251_bases
ATGGCAGCACCCGGCGAAAATCTGAGGATCAATGCGGACCGCCTCTGGGATTCCATTCACGAGATGGCCGCGATCGGCCC
CGGCATCGCCGGCGGCAACAACCGGCAGACGCTGACCGACGAAGACGGCCAGGCACGGCACCTCTTCAAGAAGTGGTGCG
AGGAAGCCGGCATGTCCGTCTCCGTGGACGCCATGGGCACTATGTTCGCGCAGCGCGAGGGCACCGACCCCGATGCCCTG
CCCGTCTATGTGGGCTCCCATCTCGATACGCAGCCGACGGGCGGCCGCTATGACGGCGTGCTGGGCGTCCTCGGCGGGTT
GGAGGTGATCCGCAGCCTCAATGACCTCGGCATCAAGACGAAGCACCCGATCGTCGTCACCAACTGGACCAACGAGGAAG
GCACCCGCTTCGCCCCGGCCATGCTCGCCTCCGGCGTCTTTGCCGGCATGCATGATCTCGAATGGGCCTATGACCGGAGG
GATGCGCAGGGAAAGCGCTTCGGCGACGAGCTGGAGCGCATCGGCTGGAAGGGCGAAGAGCCGGTCGGCGGCCGCAAGAT
GAAGGCCTTCTTCGAGCTCCACATCGAGCAAGGCCCGATTCTGGAGGACGAGGGGATTGATATAGGCGTCGTCACCCACG
GCCAGGGGCTCAAATGGCTCCAGGTGACGCTCTCCGGCCGCGAGAGCCATACCGGCTCGACGCCCATGCCCAAGCGGCGC
AACGCCGGGCTCGGCATGGCCCGCGTGATCGAGCTCGTCCATGAAGTGGCGATGGACTACCAGCCCCACGCCGTGGGCGC
CGTCGGCCACATGGAGGTCTATCCCAATTCCCGCAACATCATCCCGGGCCAAACGGTTTTCACCATAGACATTCGCTCGC
CCGACAAAAAAGTGCTCGACATGATGGATGCGCGCATCCGACAGGGCATTGCGACCATTTGCGATGCGATGGATATTACC
TCCGAAATCGAGCAGGTCGGGCATTTCGATCCCGTCACCTTCGACAAGGGATGCGTCGAGGCAATCCGCAAGGCCGCCGA
ACGGCTCGGATACACGCACCGCGATATCGTCTCCGGCGCCGGGCATGATGCCTGCTGGATCAACCGCGTGGCCCCCACGG
CCATGGTCATGTGCCCCTGCGTCGACGGCCTCTCCCACAACGAAGCCGAGATGATCACCAAGGAATGGGCGCAGGCTGGC
GCCGATGTGCTTTTCCATGCTGTGGTGGAGACGGCGGAAATCGTTGAATGA

Upstream 100 bases:

>100_bases
TGTAAGGGAAATTTTGCGATCTATAGATTAAGCGCCGGCCCTTCGGGGCTGGCCTGCATGTGAGCCGGAACGAAAGCCCA
GAAAAGACGAGGGGAACCAA

Downstream 100 bases:

>100_bases
TCGCAACTGACGGGAATGCATTCCCGCCGCGGACGAGGAGAACCTGCTTCCGACAAGAAAACGCACCGACGTCAACACAG
AAGAAGAAATCGGGGAACGT

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MAAPGENLRINADRLWDSIHEMAAIGPGIAGGNNRQTLTDEDGQARHLFKKWCEEAGMSVSVDAMGTMFAQREGTDPDAL
PVYVGSHLDTQPTGGRYDGVLGVLGGLEVIRSLNDLGIKTKHPIVVTNWTNEEGTRFAPAMLASGVFAGMHDLEWAYDRR
DAQGKRFGDELERIGWKGEEPVGGRKMKAFFELHIEQGPILEDEGIDIGVVTHGQGLKWLQVTLSGRESHTGSTPMPKRR
NAGLGMARVIELVHEVAMDYQPHAVGAVGHMEVYPNSRNIIPGQTVFTIDIRSPDKKVLDMMDARIRQGIATICDAMDIT
SEIEQVGHFDPVTFDKGCVEAIRKAAERLGYTHRDIVSGAGHDACWINRVAPTAMVMCPCVDGLSHNEAEMITKEWAQAG
ADVLFHAVVETAEIVE

Sequences:

>Translated_416_residues
MAAPGENLRINADRLWDSIHEMAAIGPGIAGGNNRQTLTDEDGQARHLFKKWCEEAGMSVSVDAMGTMFAQREGTDPDAL
PVYVGSHLDTQPTGGRYDGVLGVLGGLEVIRSLNDLGIKTKHPIVVTNWTNEEGTRFAPAMLASGVFAGMHDLEWAYDRR
DAQGKRFGDELERIGWKGEEPVGGRKMKAFFELHIEQGPILEDEGIDIGVVTHGQGLKWLQVTLSGRESHTGSTPMPKRR
NAGLGMARVIELVHEVAMDYQPHAVGAVGHMEVYPNSRNIIPGQTVFTIDIRSPDKKVLDMMDARIRQGIATICDAMDIT
SEIEQVGHFDPVTFDKGCVEAIRKAAERLGYTHRDIVSGAGHDACWINRVAPTAMVMCPCVDGLSHNEAEMITKEWAQAG
ADVLFHAVVETAEIVE
>Mature_415_residues
AAPGENLRINADRLWDSIHEMAAIGPGIAGGNNRQTLTDEDGQARHLFKKWCEEAGMSVSVDAMGTMFAQREGTDPDALP
VYVGSHLDTQPTGGRYDGVLGVLGGLEVIRSLNDLGIKTKHPIVVTNWTNEEGTRFAPAMLASGVFAGMHDLEWAYDRRD
AQGKRFGDELERIGWKGEEPVGGRKMKAFFELHIEQGPILEDEGIDIGVVTHGQGLKWLQVTLSGRESHTGSTPMPKRRN
AGLGMARVIELVHEVAMDYQPHAVGAVGHMEVYPNSRNIIPGQTVFTIDIRSPDKKVLDMMDARIRQGIATICDAMDITS
EIEQVGHFDPVTFDKGCVEAIRKAAERLGYTHRDIVSGAGHDACWINRVAPTAMVMCPCVDGLSHNEAEMITKEWAQAGA
DVLFHAVVETAEIVE

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=371, Percent_Identity=33.4231805929919, Blast_Score=190, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 45457; Mature: 45326

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPGENLRINADRLWDSIHEMAAIGPGIAGGNNRQTLTDEDGQARHLFKKWCEEAGMSV
CCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEE
SVDAMGTMFAQREGTDPDALPVYVGSHLDTQPTGGRYDGVLGVLGGLEVIRSLNDLGIKT
EHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
KHPIVVTNWTNEEGTRFAPAMLASGVFAGMHDLEWAYDRRDAQGKRFGDELERIGWKGEE
CCCEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC
PVGGRKMKAFFELHIEQGPILEDEGIDIGVVTHGQGLKWLQVTLSGRESHTGSTPMPKRR
CCCCHHHEEEHEEEECCCCEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCC
NAGLGMARVIELVHEVAMDYQPHAVGAVGHMEVYPNSRNIIPGQTVFTIDIRSPDKKVLD
CCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCHHHHH
MMDARIRQGIATICDAMDITSEIEQVGHFDPVTFDKGCVEAIRKAAERLGYTHRDIVSGA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCC
GHDACWINRVAPTAMVMCPCVDGLSHNEAEMITKEWAQAGADVLFHAVVETAEIVE
CCCHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AAPGENLRINADRLWDSIHEMAAIGPGIAGGNNRQTLTDEDGQARHLFKKWCEEAGMSV
CCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEE
SVDAMGTMFAQREGTDPDALPVYVGSHLDTQPTGGRYDGVLGVLGGLEVIRSLNDLGIKT
EHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
KHPIVVTNWTNEEGTRFAPAMLASGVFAGMHDLEWAYDRRDAQGKRFGDELERIGWKGEE
CCCEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC
PVGGRKMKAFFELHIEQGPILEDEGIDIGVVTHGQGLKWLQVTLSGRESHTGSTPMPKRR
CCCCHHHEEEHEEEECCCCEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCC
NAGLGMARVIELVHEVAMDYQPHAVGAVGHMEVYPNSRNIIPGQTVFTIDIRSPDKKVLD
CCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCHHHHH
MMDARIRQGIATICDAMDITSEIEQVGHFDPVTFDKGCVEAIRKAAERLGYTHRDIVSGA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCC
GHDACWINRVAPTAMVMCPCVDGLSHNEAEMITKEWAQAGADVLFHAVVETAEIVE
CCCHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]