Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

Click here to switch to the map view.

The map label for this gene is 110634340

Identifier: 110634340

GI number: 110634340

Start: 2133558

End: 2134019

Strand: Reverse

Name: 110634340

Synonym: Meso_1990

Alternate gene names: NA

Gene position: 2134019-2133558 (Counterclockwise)

Preceding gene: 110634341

Following gene: 110634339

Centisome position: 48.36

GC content: 56.06

Gene sequence:

>462_bases
ATGGCGCGCCTTCTTGCACTCACGAATCGTGTGGTAGTATCGGTGGCGATCGCGTGTGCCTTATCTACCGAAGTCTTAGG
ACAAGAATCCGGTGCCAGTATACGGCAAGAACCCGGTGCGGGCGTTGATACCGATGCGGGCACGACCGCCGCGACAGGCG
CTACAGATTTCGGCACGGTAATCTCAGCCATCCAGAGCAGCCGCGAACTCTCACAGCAAATCAAGAACTTAAACGATGTA
TCGGATGTAAGAATCATTCGTGTAAGCGATATCGCAAATGAGGATAGCGCCGCCGCGCTCGACAATGCCCTGAGGCAAAA
CCGGGAGGATGTCGAGGCGCTGCGTTCGGCTATCCAGGAAAACGCCCAGCTATCCGAACAGCTTCAGCAGGACGATGTGC
AAGCAGACGATGTGCTTGCAGCGGTCGACACGGGAGGACAGCTTGTCGTCTACATCCGTTAG

Upstream 100 bases:

>100_bases
TCCTGCGAAAGTGGGGAGAATAGACAGCTTGTCATTTTATGTACGGAACACCGTACCCTCGCGGAAGTTGGGCTGATGAA
ACCGAAGCAAGGAGCAGATC

Downstream 100 bases:

>100_bases
GTTGTGGAAGGCGAAGGAACAGAATGTAACGTTTGCAGCAATGCAAATTGTTTAAGCTTTGCACGTCTTTTAGGCTAATA
CGGCTTCATATTATATTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MARLLALTNRVVVSVAIACALSTEVLGQESGASIRQEPGAGVDTDAGTTAATGATDFGTVISAIQSSRELSQQIKNLNDV
SDVRIIRVSDIANEDSAAALDNALRQNREDVEALRSAIQENAQLSEQLQQDDVQADDVLAAVDTGGQLVVYIR

Sequences:

>Translated_153_residues
MARLLALTNRVVVSVAIACALSTEVLGQESGASIRQEPGAGVDTDAGTTAATGATDFGTVISAIQSSRELSQQIKNLNDV
SDVRIIRVSDIANEDSAAALDNALRQNREDVEALRSAIQENAQLSEQLQQDDVQADDVLAAVDTGGQLVVYIR
>Mature_152_residues
ARLLALTNRVVVSVAIACALSTEVLGQESGASIRQEPGAGVDTDAGTTAATGATDFGTVISAIQSSRELSQQIKNLNDVS
DVRIIRVSDIANEDSAAALDNALRQNREDVEALRSAIQENAQLSEQLQQDDVQADDVLAAVDTGGQLVVYIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16080; Mature: 15949

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLLALTNRVVVSVAIACALSTEVLGQESGASIRQEPGAGVDTDAGTTAATGATDFGTV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
ISAIQSSRELSQQIKNLNDVSDVRIIRVSDIANEDSAAALDNALRQNREDVEALRSAIQE
HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
NAQLSEQLQQDDVQADDVLAAVDTGGQLVVYIR
HHHHHHHHHHCCCCHHHHHHEECCCCEEEEEEC
>Mature Secondary Structure 
ARLLALTNRVVVSVAIACALSTEVLGQESGASIRQEPGAGVDTDAGTTAATGATDFGTV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
ISAIQSSRELSQQIKNLNDVSDVRIIRVSDIANEDSAAALDNALRQNREDVEALRSAIQE
HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
NAQLSEQLQQDDVQADDVLAAVDTGGQLVVYIR
HHHHHHHHHHCCCCHHHHHHEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA