| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634332
Identifier: 110634332
GI number: 110634332
Start: 2122452
End: 2122985
Strand: Direct
Name: 110634332
Synonym: Meso_1982
Alternate gene names: NA
Gene position: 2122452-2122985 (Clockwise)
Preceding gene: 110634331
Following gene: 110634333
Centisome position: 48.1
GC content: 58.99
Gene sequence:
>534_bases ATGCCCGAGGACCGCATTCGCTACGACATTCTCGTTCAGGAGGCGCTGCGCGGTGTTGTGCGCAAGGTGCTTCAGGAGGT GGCGCAGGCTGGGCTGCCCGGCAATCATCATTTTTTCATCCGCTTTGTGACCAATGCGCCGGGTGTGCGGATCTCCAGTC GCCTGAAGGAGCGCTATCCGGAAGAGATGACGATCGTCATCCAGTACCAGTACTGGGATCTGAAAGTGACCGAGAAAGGC TTTGAGGTCGTTCTCTCGTTCTCCGACATTCCCGAGAAGCTGGAGATACCCTTCTCGGCCGTTCGCGGCTTTTACGATCC CTCGGCGAGCTTCGAAGTCGAATTCGAGGTGAAGCAGGAGCAGCCGCACGCTGAACCTGCAGAACCGACGCTGCTCAAGG AAGAAGCGAAGCAACCAGCCAAGCGCAAGCCGGCAGCCGAGCGCAAGACGGAGGGCAATGAGGCCCCCGCGGAAGAAAAA GCCGAAGGCAAGGGTGCGGAAGTCGTCTCGCTGGATGCATTCCGCAAGAAGTAG
Upstream 100 bases:
>100_bases CGCTCTTTTTGGCTCCCTCGCCCTTTTATCGGATTTACGACTGCGCCAAGCTTTATTAGACCTAAGATGAGCGCCATCGA TTCAGGATATCCGACTGCCC
Downstream 100 bases:
>100_bases GCGATGGGCGAGCTCGTAAATCTTCGTCTCGTTCGAAAACGGAAAAACCGGGCGCAGAAAGAGCAAATCGCTGCGGAAAA TCGTACCCGCTTCGGCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MPEDRIRYDILVQEALRGVVRKVLQEVAQAGLPGNHHFFIRFVTNAPGVRISSRLKERYPEEMTIVIQYQYWDLKVTEKG FEVVLSFSDIPEKLEIPFSAVRGFYDPSASFEVEFEVKQEQPHAEPAEPTLLKEEAKQPAKRKPAAERKTEGNEAPAEEK AEGKGAEVVSLDAFRKK
Sequences:
>Translated_177_residues MPEDRIRYDILVQEALRGVVRKVLQEVAQAGLPGNHHFFIRFVTNAPGVRISSRLKERYPEEMTIVIQYQYWDLKVTEKG FEVVLSFSDIPEKLEIPFSAVRGFYDPSASFEVEFEVKQEQPHAEPAEPTLLKEEAKQPAKRKPAAERKTEGNEAPAEEK AEGKGAEVVSLDAFRKK >Mature_176_residues PEDRIRYDILVQEALRGVVRKVLQEVAQAGLPGNHHFFIRFVTNAPGVRISSRLKERYPEEMTIVIQYQYWDLKVTEKGF EVVLSFSDIPEKLEIPFSAVRGFYDPSASFEVEFEVKQEQPHAEPAEPTLLKEEAKQPAKRKPAAERKTEGNEAPAEEKA EGKGAEVVSLDAFRKK
Specific function: Unknown
COG id: COG3814
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20171; Mature: 20040
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEDRIRYDILVQEALRGVVRKVLQEVAQAGLPGNHHFFIRFVTNAPGVRISSRLKERYP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHCC EEMTIVIQYQYWDLKVTEKGFEVVLSFSDIPEKLEIPFSAVRGFYDPSASFEVEFEVKQE CCEEEEEEEEEEEEEECCCCEEEEEECCCCCHHHCCCHHHHHCCCCCCCCEEEEEEEECC QPHAEPAEPTLLKEEAKQPAKRKPAAERKTEGNEAPAEEKAEGKGAEVVSLDAFRKK CCCCCCCCCHHHHHHHHCCHHCCCCCHHCCCCCCCCCCHHCCCCCCEEEECCCHHCC >Mature Secondary Structure PEDRIRYDILVQEALRGVVRKVLQEVAQAGLPGNHHFFIRFVTNAPGVRISSRLKERYP CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHCC EEMTIVIQYQYWDLKVTEKGFEVVLSFSDIPEKLEIPFSAVRGFYDPSASFEVEFEVKQE CCEEEEEEEEEEEEEECCCCEEEEEECCCCCHHHCCCHHHHHCCCCCCCCEEEEEEEECC QPHAEPAEPTLLKEEAKQPAKRKPAAERKTEGNEAPAEEKAEGKGAEVVSLDAFRKK CCCCCCCCCHHHHHHHHCCHHCCCCCHHCCCCCCCCCCHHCCCCCCEEEECCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA