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The map label for this gene is 110634286

Identifier: 110634286

GI number: 110634286

Start: 2073331

End: 2074410

Strand: Reverse

Name: 110634286

Synonym: Meso_1936

Alternate gene names: NA

Gene position: 2074410-2073331 (Counterclockwise)

Preceding gene: 110634287

Following gene: 110634285

Centisome position: 47.01

GC content: 57.5

Gene sequence:

>1080_bases
ATGAAGACGATTGAACTATCACGAAGGAATGCTTTGAAGGTGATCGCAGGATCGAGTGCTTTATTAGCCGCGCCGGCGAT
ACTCTCACGTTCTTATGCGCAAGAAGGCGGCTTTTCCGTCGGTATTCCCGGAGGTTACGAGAAGGCTTTCCAGACTGCGT
TCCTCGACCCCTATGAGCAGGAATTCGGGATTAAGCCGACGCCCATCCTCGCTGGCACCTCGACCGTCGAGATCAAGGCC
CAAGTCGAGACGGGCAAGTTCTTCTATGATGTCCGCTTTAGCGTGGCGGCGACCGGTAACGAGGTTCTTGCCGAGGCCGG
TCTGCTCGAGCGGATAGACGACATCGATTCGGAAGATGTCCAGGCAATCTATGGTGCCTTGCCGGAAGCACAGCGTAGGC
CGACCTTCCTTCCCCACGGCTTGTCGGCACAGGTCATTGCTTTCCAGGACCATCTGGATTTCAAGGACTATGCCGATATT
TGGGACGTCGAGAACCTCCCCGGTGCGCGGGCTCTGCGGGGTCAAGGTAAGGATACTATCGAAGCCGCACTGCGTTCCAT
GGGTAAGCGGCCGAGCGAGACTGCCTCATTCCTCGCGAACGAGGATGGGTGGAAGCAGGTATTTGCTCGGCTGGACGAGA
TAAAGGACCACGTGACCAACTGGTGGGAGGAGGATTCCGACATCACCCGGCTGCTTGGCGCGCGCGAAGTTGATGTAACT
GCTTTCCCGCATCACCGAGCAATGGCCGCCGTCCAAAGCGGTGCCAGGATCAAGTACAACTATAGCCAGAGCATGACGAC
CGCGCTTGGCTGGGTGATCCCAAAGAACAGCCCACAGGCCGAGGCGGGACGCAAATTCATCGCATTCTGTTCGCGCCCCG
ACCGTATTGCCGACTTCACAATGGACGTGCCGATGGGGCCGATGCACCCCGATGTCATGGCCCTGCTGGATCCGGCTTTT
GCGGTAGCTCTGCCCACCCACCCCAACAACGTCGAAAACATTGAATCCGAGGATGTGGCATTCTGGCACAAGAATCAGGG
CCAAGCCAACGAGCGCTTTAAGGAGTGGTTACTCGGATAG

Upstream 100 bases:

>100_bases
TTTCGGGGCTGTTTGCATTGTAGTGATTGTGGCAATCCGCATCGGATCAAAAAAATAGCCTGAACGGCTAATATGGTTTC
TTTAGTGTGGAGGAGAAAAC

Downstream 100 bases:

>100_bases
CACAGGTCTGTCCGAAGCGGCATGCGGCCAGGTCGCCGTATGCCGCCTCAGGACCCGCGACTGACAGACCGTCGCGACGC
GATGCGCCGCGGAAGCTCCC

Product: putative spermidine/putrescine transport system substrate-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKTIELSRRNALKVIAGSSALLAAPAILSRSYAQEGGFSVGIPGGYEKAFQTAFLDPYEQEFGIKPTPILAGTSTVEIKA
QVETGKFFYDVRFSVAATGNEVLAEAGLLERIDDIDSEDVQAIYGALPEAQRRPTFLPHGLSAQVIAFQDHLDFKDYADI
WDVENLPGARALRGQGKDTIEAALRSMGKRPSETASFLANEDGWKQVFARLDEIKDHVTNWWEEDSDITRLLGAREVDVT
AFPHHRAMAAVQSGARIKYNYSQSMTTALGWVIPKNSPQAEAGRKFIAFCSRPDRIADFTMDVPMGPMHPDVMALLDPAF
AVALPTHPNNVENIESEDVAFWHKNQGQANERFKEWLLG

Sequences:

>Translated_359_residues
MKTIELSRRNALKVIAGSSALLAAPAILSRSYAQEGGFSVGIPGGYEKAFQTAFLDPYEQEFGIKPTPILAGTSTVEIKA
QVETGKFFYDVRFSVAATGNEVLAEAGLLERIDDIDSEDVQAIYGALPEAQRRPTFLPHGLSAQVIAFQDHLDFKDYADI
WDVENLPGARALRGQGKDTIEAALRSMGKRPSETASFLANEDGWKQVFARLDEIKDHVTNWWEEDSDITRLLGAREVDVT
AFPHHRAMAAVQSGARIKYNYSQSMTTALGWVIPKNSPQAEAGRKFIAFCSRPDRIADFTMDVPMGPMHPDVMALLDPAF
AVALPTHPNNVENIESEDVAFWHKNQGQANERFKEWLLG
>Mature_359_residues
MKTIELSRRNALKVIAGSSALLAAPAILSRSYAQEGGFSVGIPGGYEKAFQTAFLDPYEQEFGIKPTPILAGTSTVEIKA
QVETGKFFYDVRFSVAATGNEVLAEAGLLERIDDIDSEDVQAIYGALPEAQRRPTFLPHGLSAQVIAFQDHLDFKDYADI
WDVENLPGARALRGQGKDTIEAALRSMGKRPSETASFLANEDGWKQVFARLDEIKDHVTNWWEEDSDITRLLGAREVDVT
AFPHHRAMAAVQSGARIKYNYSQSMTTALGWVIPKNSPQAEAGRKFIAFCSRPDRIADFTMDVPMGPMHPDVMALLDPAF
AVALPTHPNNVENIESEDVAFWHKNQGQANERFKEWLLG

Specific function: Unknown

COG id: COG0687

COG function: function code E; Spermidine/putrescine-binding periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39686; Mature: 39686

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIELSRRNALKVIAGSSALLAAPAILSRSYAQEGGFSVGIPGGYEKAFQTAFLDPYEQ
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHCCCHHH
EFGIKPTPILAGTSTVEIKAQVETGKFFYDVRFSVAATGNEVLAEAGLLERIDDIDSEDV
HCCCCCCCEEECCCEEEEEEEEECCEEEEEEEEEEEECCHHHHHHHHHHHHHHCCCCHHH
QAIYGALPEAQRRPTFLPHGLSAQVIAFQDHLDFKDYADIWDVENLPGARALRGQGKDTI
HHHHHCCCCHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCHHHCCCCHHHH
EAALRSMGKRPSETASFLANEDGWKQVFARLDEIKDHVTNWWEEDSDITRLLGAREVDVT
HHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEE
AFPHHRAMAAVQSGARIKYNYSQSMTTALGWVIPKNSPQAEAGRKFIAFCSRPDRIADFT
ECCCHHHHHHHHCCCEEEEECCHHHHHHHHEEECCCCCCHHHCCCEEEECCCCCHHHEEE
MDVPMGPMHPDVMALLDPAFAVALPTHPNNVENIESEDVAFWHKNQGQANERFKEWLLG
ECCCCCCCCHHHHHHHCCHHEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKTIELSRRNALKVIAGSSALLAAPAILSRSYAQEGGFSVGIPGGYEKAFQTAFLDPYEQ
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHCCCHHH
EFGIKPTPILAGTSTVEIKAQVETGKFFYDVRFSVAATGNEVLAEAGLLERIDDIDSEDV
HCCCCCCCEEECCCEEEEEEEEECCEEEEEEEEEEEECCHHHHHHHHHHHHHHCCCCHHH
QAIYGALPEAQRRPTFLPHGLSAQVIAFQDHLDFKDYADIWDVENLPGARALRGQGKDTI
HHHHHCCCCHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCHHHCCCCHHHH
EAALRSMGKRPSETASFLANEDGWKQVFARLDEIKDHVTNWWEEDSDITRLLGAREVDVT
HHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEE
AFPHHRAMAAVQSGARIKYNYSQSMTTALGWVIPKNSPQAEAGRKFIAFCSRPDRIADFT
ECCCHHHHHHHHCCCEEEEECCHHHHHHHHEEECCCCCCHHHCCCEEEECCCCCHHHEEE
MDVPMGPMHPDVMALLDPAFAVALPTHPNNVENIESEDVAFWHKNQGQANERFKEWLLG
ECCCCCCCCHHHHHHHCCHHEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA