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The map label for this gene is yadH [H]

Identifier: 110634262

GI number: 110634262

Start: 2048546

End: 2049307

Strand: Direct

Name: yadH [H]

Synonym: Meso_1912

Alternate gene names: 110634262

Gene position: 2048546-2049307 (Clockwise)

Preceding gene: 110634261

Following gene: 110634263

Centisome position: 46.43

GC content: 56.56

Gene sequence:

>762_bases
GTGAATTTCGAAGCGATCAAGGCCATCTATCTCTTCGAGATGGCGCGCATGCGGCGCACGCTCCTCCAAAGCGTGGTCTC
GCCCGTTCTTTCAACATCCCTCTATTTCGTGGTTTTCGGGGCGGCAATCGGCGGCCGCATCGAGGAGGTGGACGGCGTCC
AATATGGCGCCTTCATCGTTCCCGGCCTGATGATGCTGACGCTGCTTCAGAACTCGATCGCCAACGCTTCCTTTGGCATC
TATTTCCCAAAATTCGTCGGCACCATCTATGAGGTGCTTTCCGCGCCTGTTTCCTTCGTCGAGATCGTGATCGGCTATGT
GGGAGCCGCCGCAAGCAAATCCTTGATCCTCGGCATCATCATTCTGGCGACGGCGCATATTTTCGTGCCACTCGAGATCC
AACACCCCTTCTGGATGGCGCTCTTCCTGGTTCTGACCGCCGTCACCTTCAGCCTTTTCGGTTTCATCATCGGTATTTGG
GCGGATAACTTCGAGAAGCTGCAGCTTATCCCGCTGCTCATCGTGACGCCTCTCGTTTTCCTCGGCGGATCCTTCTATTC
CATCGACATGCTGCCGCCCTTCTGGCGCGATGTGACGCTTTTCAACCCCGTGCTCTACCTCATCAGCGGCTTCCGCTGGA
GCTTCTTCGAGACCGCCGATGTGAGCGTCGGCGTCAGCATCGCGATGATCTGCGTTTTCCTGACGATCTGCATCGCGCTG
GTGTGGTGGATTTTCAGGACGGGATATCGGCTCAAGGCTTAA

Upstream 100 bases:

>100_bases
TCCTCGCCGACCTCAACCGCGCCGGCATATCCGTCAAAGACCTCGATACGCAGCAGAGTTCGCTCGAGGATATTTTCGTA
AGTCTTGTGGAGGAAGCGCG

Downstream 100 bases:

>100_bases
GCGACTAGGATTAATCCTAATCTTCACCCCGTCGACGGCATCAAAGTGATATAGTCTCATCACTTCGTGGAAGCGCAACC
GCGCTCCCGATGCGTGGTGA

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MNFEAIKAIYLFEMARMRRTLLQSVVSPVLSTSLYFVVFGAAIGGRIEEVDGVQYGAFIVPGLMMLTLLQNSIANASFGI
YFPKFVGTIYEVLSAPVSFVEIVIGYVGAAASKSLILGIIILATAHIFVPLEIQHPFWMALFLVLTAVTFSLFGFIIGIW
ADNFEKLQLIPLLIVTPLVFLGGSFYSIDMLPPFWRDVTLFNPVLYLISGFRWSFFETADVSVGVSIAMICVFLTICIAL
VWWIFRTGYRLKA

Sequences:

>Translated_253_residues
MNFEAIKAIYLFEMARMRRTLLQSVVSPVLSTSLYFVVFGAAIGGRIEEVDGVQYGAFIVPGLMMLTLLQNSIANASFGI
YFPKFVGTIYEVLSAPVSFVEIVIGYVGAAASKSLILGIIILATAHIFVPLEIQHPFWMALFLVLTAVTFSLFGFIIGIW
ADNFEKLQLIPLLIVTPLVFLGGSFYSIDMLPPFWRDVTLFNPVLYLISGFRWSFFETADVSVGVSIAMICVFLTICIAL
VWWIFRTGYRLKA
>Mature_253_residues
MNFEAIKAIYLFEMARMRRTLLQSVVSPVLSTSLYFVVFGAAIGGRIEEVDGVQYGAFIVPGLMMLTLLQNSIANASFGI
YFPKFVGTIYEVLSAPVSFVEIVIGYVGAAASKSLILGIIILATAHIFVPLEIQHPFWMALFLVLTAVTFSLFGFIIGIW
ADNFEKLQLIPLLIVTPLVFLGGSFYSIDMLPPFWRDVTLFNPVLYLISGFRWSFFETADVSVGVSIAMICVFLTICIAL
VWWIFRTGYRLKA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=249, Percent_Identity=39.3574297188755, Blast_Score=193, Evalue=8e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28188; Mature: 28188

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFEAIKAIYLFEMARMRRTLLQSVVSPVLSTSLYFVVFGAAIGGRIEEVDGVQYGAFIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHH
PGLMMLTLLQNSIANASFGIYFPKFVGTIYEVLSAPVSFVEIVIGYVGAAASKSLILGII
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
ILATAHIFVPLEIQHPFWMALFLVLTAVTFSLFGFIIGIWADNFEKLQLIPLLIVTPLVF
HHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LGGSFYSIDMLPPFWRDVTLFNPVLYLISGFRWSFFETADVSVGVSIAMICVFLTICIAL
HCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VWWIFRTGYRLKA
HHHHHHCCCCCCC
>Mature Secondary Structure
MNFEAIKAIYLFEMARMRRTLLQSVVSPVLSTSLYFVVFGAAIGGRIEEVDGVQYGAFIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHH
PGLMMLTLLQNSIANASFGIYFPKFVGTIYEVLSAPVSFVEIVIGYVGAAASKSLILGII
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
ILATAHIFVPLEIQHPFWMALFLVLTAVTFSLFGFIIGIWADNFEKLQLIPLLIVTPLVF
HHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LGGSFYSIDMLPPFWRDVTLFNPVLYLISGFRWSFFETADVSVGVSIAMICVFLTICIAL
HCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VWWIFRTGYRLKA
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]