| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634243
Identifier: 110634243
GI number: 110634243
Start: 2030460
End: 2031041
Strand: Reverse
Name: 110634243
Synonym: Meso_1893
Alternate gene names: NA
Gene position: 2031041-2030460 (Counterclockwise)
Preceding gene: 110634244
Following gene: 110634242
Centisome position: 46.03
GC content: 59.28
Gene sequence:
>582_bases ATGAGCATCGCGAATGACATAACCATCACGATAGGCGGGGAGCAAATCACTCTCCGCCCGTCATTGCGTCATGCTATCCG CCTAGAACGACGCGAAGGTTCCTTTGCCCGGCTCATGCGTGAGGTGGCGGAAGACAGCTTGTCAGCGGCACATGAGATCA TTGGGCCGCATTGTCCGCACCTCTCCCCGGCTGACGTTCTCGACGCGGGCTTGTCCAACCTGAAATTCCCTTTGATCGCC TACATCGGCAGATGCACGGGTATCGAGACCGAAGACGCTCCCGCCGAAGGTGAGGACAAGGGCAGCGCCGAAGGCAAGAC CGTCACCATTTCCGAGCACCTTAACGGGCTCTACCGCACCGGCACCGGTTGGCTAGGCTGGACCCCAGCCGAAACCCTCG ACAGCACCCCCGCCGAAATCATCGAAGCCTACAAAGGCCGGATGGAGATGTTGAAAGCGATCTTCGGCGGCGGGGAAGAC AAGCCCAAACCAGAAACCAAAGCCTTTACCGACGACAATGTGAAGTCTGCTTTCCGCGCGTTGGGCACTGTCATCCAGAC GGCGGCGGGAAAGGCGGAATGA
Upstream 100 bases:
>100_bases CGAAAACCACGTTCGCACTGGCTATCAGTGGCGCGATTATCGAAGTTCCCGCCACGGCAGGCGCTTAGTTCGAGAACTTT GCAACCGGGTGCAAAATCCC
Downstream 100 bases:
>100_bases GATGCCTATGCGTGCTCCATCCCTTCGCGCTTGCGGTTGCGTCGTCGCTCCCGGTCAGCGTTGCAAGCACATGATCGATG CCGACCGCGAACGTAAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MSIANDITITIGGEQITLRPSLRHAIRLERREGSFARLMREVAEDSLSAAHEIIGPHCPHLSPADVLDAGLSNLKFPLIA YIGRCTGIETEDAPAEGEDKGSAEGKTVTISEHLNGLYRTGTGWLGWTPAETLDSTPAEIIEAYKGRMEMLKAIFGGGED KPKPETKAFTDDNVKSAFRALGTVIQTAAGKAE
Sequences:
>Translated_193_residues MSIANDITITIGGEQITLRPSLRHAIRLERREGSFARLMREVAEDSLSAAHEIIGPHCPHLSPADVLDAGLSNLKFPLIA YIGRCTGIETEDAPAEGEDKGSAEGKTVTISEHLNGLYRTGTGWLGWTPAETLDSTPAEIIEAYKGRMEMLKAIFGGGED KPKPETKAFTDDNVKSAFRALGTVIQTAAGKAE >Mature_192_residues SIANDITITIGGEQITLRPSLRHAIRLERREGSFARLMREVAEDSLSAAHEIIGPHCPHLSPADVLDAGLSNLKFPLIAY IGRCTGIETEDAPAEGEDKGSAEGKTVTISEHLNGLYRTGTGWLGWTPAETLDSTPAEIIEAYKGRMEMLKAIFGGGEDK PKPETKAFTDDNVKSAFRALGTVIQTAAGKAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20718; Mature: 20586
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIANDITITIGGEQITLRPSLRHAIRLERREGSFARLMREVAEDSLSAAHEIIGPHCPH CCCCCCEEEEECCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC LSPADVLDAGLSNLKFPLIAYIGRCTGIETEDAPAEGEDKGSAEGKTVTISEHLNGLYRT CCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHHCHHHHC GTGWLGWTPAETLDSTPAEIIEAYKGRMEMLKAIFGGGEDKPKPETKAFTDDNVKSAFRA CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH LGTVIQTAAGKAE HHHHHHHHCCCCC >Mature Secondary Structure SIANDITITIGGEQITLRPSLRHAIRLERREGSFARLMREVAEDSLSAAHEIIGPHCPH CCCCCEEEEECCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC LSPADVLDAGLSNLKFPLIAYIGRCTGIETEDAPAEGEDKGSAEGKTVTISEHLNGLYRT CCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHHCHHHHC GTGWLGWTPAETLDSTPAEIIEAYKGRMEMLKAIFGGGEDKPKPETKAFTDDNVKSAFRA CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH LGTVIQTAAGKAE HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA