| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634232
Identifier: 110634232
GI number: 110634232
Start: 2022276
End: 2022986
Strand: Direct
Name: 110634232
Synonym: Meso_1882
Alternate gene names: NA
Gene position: 2022276-2022986 (Clockwise)
Preceding gene: 110634224
Following gene: 110634240
Centisome position: 45.83
GC content: 53.59
Gene sequence:
>711_bases GTGCGGACAATGACAAAAGTGCAAAGCTGGATAGTCTTCATCTGCTCAACCGCTGCACTCATAGGGTTTTGCTTTTGGTT CTACGCAGAACCCTCCTTTGAGCCTGCAATAGGCATAATTGCCGGTATCGGCGGCGTTGTCGGCAGCTTTTGGCCATTCT CGCCCCAAAAGCCCCGCCTGAGTCCTGAGGAGCGCATTGCCGCGCGTGACAAATGGCGTCCAATCTTCCGAGACTATTTC CTTAATGCTGCGCGTAAGGACTATCGTGGTGACTGCATCGTGCACGATGTGAACCGTCTCGATGACTATCCAAACACCGA AGAGAATCCCAAGGGCATTTCCCCATGGTTCCGCGTTGGCCTCATGGGTACATACGAGGGCGGCGTGTTGTTGGGGCTCC GATGGACGTACCTTGTTGATGAAGGCGGAACGTGGAAGGAGTACGAGTCACGCAAGCCTGACGGCGCTGTAAAGGTGATG CTTTTGGGCGAAGTGCCTTACGAATCTATCGAGTCGGTAAACTTCGACGGCGACGATTATTACAACAAGCCGCACCTGTT TTGTCACTTTGAGCACGGTGGCGAGCCATATAAACGGCTGTTCTACGGCGAGGAATTTCGGCTTGATCCTGGCTTTCCCC ATCACTACCGAGAGATAGCAGAATACCAACACAAGCCGGCCCGATGGCAGTTTTGGAAGAGAGGTGGCTGA
Upstream 100 bases:
>100_bases GACCGCATTCGCAGGCAGTGACCGCCGATCTATGACCAGCCTGCCAGTTTACCTTCACGCACCGCACCGCTAAACCTCTA CACCAATAGGGGCTTGGATC
Downstream 100 bases:
>100_bases GCGGGGAAAGCTAAATCTAAAGGCTCGTTCACAACCGTTTGCAACCGGTGCAAAAAACACCGCCCTACGGGTCGAACACC TCTTCGAAAGCCGCACTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MRTMTKVQSWIVFICSTAALIGFCFWFYAEPSFEPAIGIIAGIGGVVGSFWPFSPQKPRLSPEERIAARDKWRPIFRDYF LNAARKDYRGDCIVHDVNRLDDYPNTEENPKGISPWFRVGLMGTYEGGVLLGLRWTYLVDEGGTWKEYESRKPDGAVKVM LLGEVPYESIESVNFDGDDYYNKPHLFCHFEHGGEPYKRLFYGEEFRLDPGFPHHYREIAEYQHKPARWQFWKRGG
Sequences:
>Translated_236_residues MRTMTKVQSWIVFICSTAALIGFCFWFYAEPSFEPAIGIIAGIGGVVGSFWPFSPQKPRLSPEERIAARDKWRPIFRDYF LNAARKDYRGDCIVHDVNRLDDYPNTEENPKGISPWFRVGLMGTYEGGVLLGLRWTYLVDEGGTWKEYESRKPDGAVKVM LLGEVPYESIESVNFDGDDYYNKPHLFCHFEHGGEPYKRLFYGEEFRLDPGFPHHYREIAEYQHKPARWQFWKRGG >Mature_236_residues MRTMTKVQSWIVFICSTAALIGFCFWFYAEPSFEPAIGIIAGIGGVVGSFWPFSPQKPRLSPEERIAARDKWRPIFRDYF LNAARKDYRGDCIVHDVNRLDDYPNTEENPKGISPWFRVGLMGTYEGGVLLGLRWTYLVDEGGTWKEYESRKPDGAVKVM LLGEVPYESIESVNFDGDDYYNKPHLFCHFEHGGEPYKRLFYGEEFRLDPGFPHHYREIAEYQHKPARWQFWKRGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27513; Mature: 27513
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTMTKVQSWIVFICSTAALIGFCFWFYAEPSFEPAIGIIAGIGGVVGSFWPFSPQKPRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC SPEERIAARDKWRPIFRDYFLNAARKDYRGDCIVHDVNRLDDYPNTEENPKGISPWFRVG CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCCCCHHHHHE LMGTYEGGVLLGLRWTYLVDEGGTWKEYESRKPDGAVKVMLLGEVPYESIESVNFDGDDY EEEECCCCEEEEEEEEEEEECCCCCHHHHCCCCCCCEEEEEECCCCHHHHHHCCCCCCCC YNKPHLFCHFEHGGEPYKRLFYGEEFRLDPGFPHHYREIAEYQHKPARWQFWKRGG CCCCEEEEEECCCCCHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCCCCEECCC >Mature Secondary Structure MRTMTKVQSWIVFICSTAALIGFCFWFYAEPSFEPAIGIIAGIGGVVGSFWPFSPQKPRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC SPEERIAARDKWRPIFRDYFLNAARKDYRGDCIVHDVNRLDDYPNTEENPKGISPWFRVG CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCCCCHHHHHE LMGTYEGGVLLGLRWTYLVDEGGTWKEYESRKPDGAVKVMLLGEVPYESIESVNFDGDDY EEEECCCCEEEEEEEEEEEECCCCCHHHHCCCCCCCEEEEEECCCCHHHHHHCCCCCCCC YNKPHLFCHFEHGGEPYKRLFYGEEFRLDPGFPHHYREIAEYQHKPARWQFWKRGG CCCCEEEEEECCCCCHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA