| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is glnA [H]
Identifier: 110634220
GI number: 110634220
Start: 2010354
End: 2011721
Strand: Reverse
Name: glnA [H]
Synonym: Meso_1870
Alternate gene names: 110634220
Gene position: 2011721-2010354 (Counterclockwise)
Preceding gene: 110634221
Following gene: 110634219
Centisome position: 45.59
GC content: 62.13
Gene sequence:
>1368_bases ATGTCCGGATATTCATTTGAAGACCTGAAGGCGGATGTCAGCGCGGGACGTATTGACACCGTCATCGCCTGCCAGGTCGA CATGCAGGGCAGGCTGATGGGCAAGCGCTTCCATGCGCAGTTCTTCATTGATGGCGGCTATACGGAAACGCACAGCTGCA ACTACCTGCTGGCCACCGATCTCGAAATGGAGACCGTGCCGGGCTACAAGGCAACGAGCTGGCAGGCCGGCTATGGCGAT TACGTGATGAAGCCAGACTTATCGACGCTCCGGCGGGTCCCGTGGCTGGAGGCGACCGCGATGGTTCTGTGCGACGTGCT CGATCATCACAGCCACCGCGAGGTCTCACATTCCCCGCGCGCGGTGTTGAAGGGACAGATTGCCCGGCTGGAGGCTATGG GCTTCCAGGCATTCATGGCCACCGAGCTGGAATTTTTTCTGTTTAATCAAAGCTACGAAGAGGCGAGGGAACAGGGATAT CGCGGTCTCCGCACAGTGGGTGGGTACAACGAGGACTATCACATCTTCCAGACCACCAAGGAGGAAGACGTGATGCGCGC CATACGGAACGGCCTCCAGGGGGCGGGCATCCCTGTCGAGAACACCAAGGGCGAAGCCTCGGCCGGGCAGGGCGAGGTCA ATGTGCGCTACGCCGACGCGCTGACCATGGCCGACCGCCACGTCATAATCAAGAACGCCTGCAAGGAGATCGCCTGGTCC CGGGGCAAGTCGATCACCTTCCTCGCAAAATGGAACGCGAATGCCGCCGGCAGTTCGTCACACATCCACCAGTCGCTGTG GAGCGCCGACGGCAAGACGCCGATGTTTCTCGACGAAGGAGCCGAGTTCGGCATGTCGTCGCTGATGCGCCATTATGTGG CCGGTCTGCTGGCCCACGCCTCGGAGATTACCGCTTTCCTTGCTCCCTACGTCAATTCCTACAAGCGCTTCGTCGCGGGC ACGTTCGCCCCCACCAAGGCTGTATGGAGTAGGGACAACCGCACGGCGGGGTATCGCCTCTGCGGCGAGGGCACCAAGGG CATCCGCATAGAATGCCGGGTCGGCGGTTCCGACCTCAATCCGTATCTGGCGATGGCAGCCCTGATCGCCGCCGGCATCG ACGGTATCGAACGCGAGTTGCCCCTGGAGGCGCCGTTCGTCGGGGACGCCTATGGCGGTACGCAGGTCCGGGAAATTCCG AAGACGCTGCGGGAGGCGACGGTCGCCTTGGACGAGTCAAGCCTGCTGCGCTCGGCCTTCGGCGACGAGGTGGTCGACCA CTATGTCAGGGCGGCCCGCTGGGAGCAGGAAGTCGCCGATAAGCTCATTGCCGACTGGGAGATCGCCCGCGGCTTTGAAC GTTGCTGA
Upstream 100 bases:
>100_bases TGGAGTTTCATCTCCTGCGCGCCCTGGTCGATGCCCTAGGCCCGGTAAATACCTGAGTCAGAGCGATCCGTTCGCGGACG AGCAGCAGCAAGGAAAGCAT
Downstream 100 bases:
>100_bases GAGACGTCCAACAAGCATTCCAAAAGCGACGGCAGGAGTAAAGTCTGTGACGATTCTGAAGTGTATCTCGCCCATTGACG GGTCCGTCTATGCCGAGCGC
Product: L-glutamine synthetase
Products: NA
Alternate protein names: GS; Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MSGYSFEDLKADVSAGRIDTVIACQVDMQGRLMGKRFHAQFFIDGGYTETHSCNYLLATDLEMETVPGYKATSWQAGYGD YVMKPDLSTLRRVPWLEATAMVLCDVLDHHSHREVSHSPRAVLKGQIARLEAMGFQAFMATELEFFLFNQSYEEAREQGY RGLRTVGGYNEDYHIFQTTKEEDVMRAIRNGLQGAGIPVENTKGEASAGQGEVNVRYADALTMADRHVIIKNACKEIAWS RGKSITFLAKWNANAAGSSSHIHQSLWSADGKTPMFLDEGAEFGMSSLMRHYVAGLLAHASEITAFLAPYVNSYKRFVAG TFAPTKAVWSRDNRTAGYRLCGEGTKGIRIECRVGGSDLNPYLAMAALIAAGIDGIERELPLEAPFVGDAYGGTQVREIP KTLREATVALDESSLLRSAFGDEVVDHYVRAARWEQEVADKLIADWEIARGFERC
Sequences:
>Translated_455_residues MSGYSFEDLKADVSAGRIDTVIACQVDMQGRLMGKRFHAQFFIDGGYTETHSCNYLLATDLEMETVPGYKATSWQAGYGD YVMKPDLSTLRRVPWLEATAMVLCDVLDHHSHREVSHSPRAVLKGQIARLEAMGFQAFMATELEFFLFNQSYEEAREQGY RGLRTVGGYNEDYHIFQTTKEEDVMRAIRNGLQGAGIPVENTKGEASAGQGEVNVRYADALTMADRHVIIKNACKEIAWS RGKSITFLAKWNANAAGSSSHIHQSLWSADGKTPMFLDEGAEFGMSSLMRHYVAGLLAHASEITAFLAPYVNSYKRFVAG TFAPTKAVWSRDNRTAGYRLCGEGTKGIRIECRVGGSDLNPYLAMAALIAAGIDGIERELPLEAPFVGDAYGGTQVREIP KTLREATVALDESSLLRSAFGDEVVDHYVRAARWEQEVADKLIADWEIARGFERC >Mature_454_residues SGYSFEDLKADVSAGRIDTVIACQVDMQGRLMGKRFHAQFFIDGGYTETHSCNYLLATDLEMETVPGYKATSWQAGYGDY VMKPDLSTLRRVPWLEATAMVLCDVLDHHSHREVSHSPRAVLKGQIARLEAMGFQAFMATELEFFLFNQSYEEAREQGYR GLRTVGGYNEDYHIFQTTKEEDVMRAIRNGLQGAGIPVENTKGEASAGQGEVNVRYADALTMADRHVIIKNACKEIAWSR GKSITFLAKWNANAAGSSSHIHQSLWSADGKTPMFLDEGAEFGMSSLMRHYVAGLLAHASEITAFLAPYVNSYKRFVAGT FAPTKAVWSRDNRTAGYRLCGEGTKGIRIECRVGGSDLNPYLAMAALIAAGIDGIERELPLEAPFVGDAYGGTQVREIPK TLREATVALDESSLLRSAFGDEVVDHYVRAARWEQEVADKLIADWEIARGFERC
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Homo sapiens, GI221307485, Length=442, Percent_Identity=26.6968325791855, Blast_Score=149, Evalue=5e-36, Organism=Escherichia coli, GI87081870, Length=340, Percent_Identity=31.1764705882353, Blast_Score=141, Evalue=9e-35, Organism=Escherichia coli, GI1790301, Length=395, Percent_Identity=30.379746835443, Blast_Score=131, Evalue=7e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 50396; Mature: 50265
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGYSFEDLKADVSAGRIDTVIACQVDMQGRLMGKRFHAQFFIDGGYTETHSCNYLLATD CCCCCCHHHHHHCCCCCEEEEEEEEECCCCHHHCEEEEEEEEEECCCCCCCCCCEEEEEC LEMETVPGYKATSWQAGYGDYVMKPDLSTLRRVPWLEATAMVLCDVLDHHSHREVSHSPR CEEECCCCCCCCCCCCCCCCEEECCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCH AVLKGQIARLEAMGFQAFMATELEFFLFNQSYEEAREQGYRGLRTVGGYNEDYHIFQTTK HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCHHHHCCCCCCCEEEEECCC EEDVMRAIRNGLQGAGIPVENTKGEASAGQGEVNVRYADALTMADRHVIIKNACKEIAWS HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHC RGKSITFLAKWNANAAGSSSHIHQSLWSADGKTPMFLDEGAEFGMSSLMRHYVAGLLAHA CCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEECCCHHCCHHHHHHHHHHHHHHHH SEITAFLAPYVNSYKRFVAGTFAPTKAVWSRDNRTAGYRLCGEGTKGIRIECRVGGSDLN HHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEECCCCCCEEEEEEECCCCCC PYLAMAALIAAGIDGIERELPLEAPFVGDAYGGTQVREIPKTLREATVALDESSLLRSAF HHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH GDEVVDHYVRAARWEQEVADKLIADWEIARGFERC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGYSFEDLKADVSAGRIDTVIACQVDMQGRLMGKRFHAQFFIDGGYTETHSCNYLLATD CCCCCHHHHHHCCCCCEEEEEEEEECCCCHHHCEEEEEEEEEECCCCCCCCCCEEEEEC LEMETVPGYKATSWQAGYGDYVMKPDLSTLRRVPWLEATAMVLCDVLDHHSHREVSHSPR CEEECCCCCCCCCCCCCCCCEEECCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCH AVLKGQIARLEAMGFQAFMATELEFFLFNQSYEEAREQGYRGLRTVGGYNEDYHIFQTTK HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCHHHHCCCCCCCEEEEECCC EEDVMRAIRNGLQGAGIPVENTKGEASAGQGEVNVRYADALTMADRHVIIKNACKEIAWS HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHC RGKSITFLAKWNANAAGSSSHIHQSLWSADGKTPMFLDEGAEFGMSSLMRHYVAGLLAHA CCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEECCCHHCCHHHHHHHHHHHHHHHH SEITAFLAPYVNSYKRFVAGTFAPTKAVWSRDNRTAGYRLCGEGTKGIRIECRVGGSDLN HHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEECCCCCCEEEEEEECCCCCC PYLAMAALIAAGIDGIERELPLEAPFVGDAYGGTQVREIPKTLREATVALDESSLLRSAF HHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH GDEVVDHYVRAARWEQEVADKLIADWEIARGFERC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9864338 [H]