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The map label for this gene is yfhF [C]

Identifier: 110634127

GI number: 110634127

Start: 1897770

End: 1898156

Strand: Reverse

Name: yfhF [C]

Synonym: Meso_1776

Alternate gene names: 110634127

Gene position: 1898156-1897770 (Counterclockwise)

Preceding gene: 110634128

Following gene: 110634125

Centisome position: 43.02

GC content: 60.98

Gene sequence:

>387_bases
ATGGGTCGATTTCAGGTGATGACGATGACCGACGCCGCGGCTGCTCGTGTGCGCGAAATCGTCGAGACGCGCGAGGGCGC
GCACGGCATCCGCGTGGGCATCAAGAAGGGCGGCTGTGCCGGAATGGAATATACGATCGATCTGGTCACCGAGCCCAACC
CGAAGGACGACCATATCGAGCGAGATGGCGTTCATGTTTATGTGGCGCCGGAAGCGGCTCTTTTCTTGCTCGGCACCGAA
ATGGATTTCGAGGTGACGCGGATCCGGACGGGCTTCGTCTTCAACAATCCCAACCAGAGCTCCGCCTGCGGCTGCGGCGA
ATCGGTCGAATTGAAGCCTGCCGATCTGAAGGCATTAGCCGAGGCAAGGGAAACGGGCGCGGCCTGA

Upstream 100 bases:

>100_bases
TGGTATTGAGGGCGGCGGCGCTTGCAACGTACCGCTTTCCGGACCATTTTAGAATGAGAACCTTCCGCGAGCCTTGAACT
CGCCGTGAACGGAGAAACAG

Downstream 100 bases:

>100_bases
GGCCAGGCTTTTCAAGCTGCTAATACCCCCTCTCTTGCGTTTTCCATGCACTTGCTCGGGGCAAGCCCACTCGCAAGTAC
AGGAAAACGCTTTTTCCCCC

Product: FeS assembly scaffold SufA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MGRFQVMTMTDAAAARVREIVETREGAHGIRVGIKKGGCAGMEYTIDLVTEPNPKDDHIERDGVHVYVAPEAALFLLGTE
MDFEVTRIRTGFVFNNPNQSSACGCGESVELKPADLKALAEARETGAA

Sequences:

>Translated_128_residues
MGRFQVMTMTDAAAARVREIVETREGAHGIRVGIKKGGCAGMEYTIDLVTEPNPKDDHIERDGVHVYVAPEAALFLLGTE
MDFEVTRIRTGFVFNNPNQSSACGCGESVELKPADLKALAEARETGAA
>Mature_127_residues
GRFQVMTMTDAAAARVREIVETREGAHGIRVGIKKGGCAGMEYTIDLVTEPNPKDDHIERDGVHVYVAPEAALFLLGTEM
DFEVTRIRTGFVFNNPNQSSACGCGESVELKPADLKALAEARETGAA

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=105, Percent_Identity=36.1904761904762, Blast_Score=94, Evalue=4e-20,
Organism=Homo sapiens, GI160420328, Length=107, Percent_Identity=35.5140186915888, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1788877, Length=105, Percent_Identity=41.9047619047619, Blast_Score=95, Evalue=1e-21,
Organism=Escherichia coli, GI1787974, Length=105, Percent_Identity=42.8571428571429, Blast_Score=95, Evalue=2e-21,
Organism=Escherichia coli, GI1786351, Length=106, Percent_Identity=33.0188679245283, Blast_Score=68, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI193209025, Length=105, Percent_Identity=36.1904761904762, Blast_Score=102, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI25146411, Length=105, Percent_Identity=36.1904761904762, Blast_Score=102, Evalue=5e-23,
Organism=Saccharomyces cerevisiae, GI6323001, Length=103, Percent_Identity=34.9514563106796, Blast_Score=80, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24642263, Length=105, Percent_Identity=40, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 13798; Mature: 13667

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRFQVMTMTDAAAARVREIVETREGAHGIRVGIKKGGCAGMEYTIDLVTEPNPKDDHIE
CCCEEEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCC
RDGVHVYVAPEAALFLLGTEMDFEVTRIRTGFVFNNPNQSSACGCGESVELKPADLKALA
CCCEEEEECCCEEEEEEECCCCEEEEEEEEEEEEECCCCCCCCCCCCCCEECCHHHHHHH
EARETGAA
HHHHCCCC
>Mature Secondary Structure 
GRFQVMTMTDAAAARVREIVETREGAHGIRVGIKKGGCAGMEYTIDLVTEPNPKDDHIE
CCEEEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCC
RDGVHVYVAPEAALFLLGTEMDFEVTRIRTGFVFNNPNQSSACGCGESVELKPADLKALA
CCCEEEEECCCEEEEEEECCCCEEEEEEEEEEEEECCCCCCCCCCCCCCEECCHHHHHHH
EARETGAA
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]