| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634076
Identifier: 110634076
GI number: 110634076
Start: 1847452
End: 1848060
Strand: Direct
Name: 110634076
Synonym: Meso_1725
Alternate gene names: NA
Gene position: 1847452-1848060 (Clockwise)
Preceding gene: 110634075
Following gene: 110634077
Centisome position: 41.87
GC content: 59.44
Gene sequence:
>609_bases GTGACCATGGTCGTTGAAGCGAACCAGACAGCCCTGCGCACCGAAAGGCGCCGCTTTCAGCGCGTCAAGATCAGCATATA TGGCCGCTATATGCTCCCGGACCGCTCGGAGCATTCCTGCCGCGTCGTCGATATGTCGCCCGGTAGCGTCGCGCTTAAGG CAGCGCAAGCAGGGCAGGTCGGCGAACGGATCGTCGCATATCTCGACCATATCGGTCGCGTTGAAGGCTATCTTGCGCGC ATCTTCGAAGATGGCTTTGAGATGACGATCAAGGCCTCGCAGAGGAAGCGCGACAAGCTGGCGTCACAACTGACTTGGCT CGCCAACCGGCATGATCTCGATCTACCGGAAGATCGGCGCTACGAGCGGGTTACACCAGCAAACCCGATGAGCACGATAC GAACGCCCGATGGGTACGAGCATCCCTGCCGCATCGTCGATCTCTCCGCTTCCGGCGCCGCGATTGAAACCGCACCTAGA CCGGCGATCGGCACCCAGGTTTTCCTTGCGAATTTGCGCGGTCGCGTCACCCGCCATTTCGAAAATGGCTTTGCCCTGGA ATTTTCTTTGATCCAGGAGCCGGCTACGCTGCTCGCGCAATTCGCGTAA
Upstream 100 bases:
>100_bases TTCGATGGGGGCCGCCGCCGCTAGCGGCTTACCCGATTTTAACCAAACATTGCTAGGATTGGCCGTTTCGTCGACTAGGT ATTGGTCGACGGAAAAGCGA
Downstream 100 bases:
>100_bases CGCTGAACGCCCCACATTCATCGATTGCAGAGCCGGCTAACGCTGCGTGCGCTGGAAAATTACCGCGTTCCCAGTATTTC CGGCCTTTAGACTGCTTCAG
Product: type IV pilus assembly PilZ
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilZ
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTMVVEANQTALRTERRRFQRVKISIYGRYMLPDRSEHSCRVVDMSPGSVALKAAQAGQVGERIVAYLDHIGRVEGYLAR IFEDGFEMTIKASQRKRDKLASQLTWLANRHDLDLPEDRRYERVTPANPMSTIRTPDGYEHPCRIVDLSASGAAIETAPR PAIGTQVFLANLRGRVTRHFENGFALEFSLIQEPATLLAQFA
Sequences:
>Translated_202_residues MTMVVEANQTALRTERRRFQRVKISIYGRYMLPDRSEHSCRVVDMSPGSVALKAAQAGQVGERIVAYLDHIGRVEGYLAR IFEDGFEMTIKASQRKRDKLASQLTWLANRHDLDLPEDRRYERVTPANPMSTIRTPDGYEHPCRIVDLSASGAAIETAPR PAIGTQVFLANLRGRVTRHFENGFALEFSLIQEPATLLAQFA >Mature_201_residues TMVVEANQTALRTERRRFQRVKISIYGRYMLPDRSEHSCRVVDMSPGSVALKAAQAGQVGERIVAYLDHIGRVEGYLARI FEDGFEMTIKASQRKRDKLASQLTWLANRHDLDLPEDRRYERVTPANPMSTIRTPDGYEHPCRIVDLSASGAAIETAPRP AIGTQVFLANLRGRVTRHFENGFALEFSLIQEPATLLAQFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22803; Mature: 22672
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMVVEANQTALRTERRRFQRVKISIYGRYMLPDRSEHSCRVVDMSPGSVALKAAQAGQV CEEEEECCHHHHHHHHHHHHEEEEEEEEEEECCCCCCCCEEEEEECCCCEEEEEHHCCHH GERIVAYLDHIGRVEGYLARIFEDGFEMTIKASQRKRDKLASQLTWLANRHDLDLPEDRR HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCC YERVTPANPMSTIRTPDGYEHPCRIVDLSASGAAIETAPRPAIGTQVFLANLRGRVTRHF CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHH ENGFALEFSLIQEPATLLAQFA CCCEEEEEHHHHCHHHHHHHCC >Mature Secondary Structure TMVVEANQTALRTERRRFQRVKISIYGRYMLPDRSEHSCRVVDMSPGSVALKAAQAGQV EEEEECCHHHHHHHHHHHHEEEEEEEEEEECCCCCCCCEEEEEECCCCEEEEEHHCCHH GERIVAYLDHIGRVEGYLARIFEDGFEMTIKASQRKRDKLASQLTWLANRHDLDLPEDRR HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCC YERVTPANPMSTIRTPDGYEHPCRIVDLSASGAAIETAPRPAIGTQVFLANLRGRVTRHF CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHH ENGFALEFSLIQEPATLLAQFA CCCEEEEEHHHHCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA