| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634070
Identifier: 110634070
GI number: 110634070
Start: 1842033
End: 1842458
Strand: Reverse
Name: 110634070
Synonym: Meso_1718
Alternate gene names: NA
Gene position: 1842458-1842033 (Counterclockwise)
Preceding gene: 110634071
Following gene: 110634062
Centisome position: 41.76
GC content: 60.09
Gene sequence:
>426_bases ATGAGGGGAGCAAAAAGCATCTCTCGGGATGCGGTGAGAACCGCCGCAGCGGCGATGGCCGCGGTCTTCCTGGCTTTTCC GGCTCATGCAGAGCGAATCAAGAACCCGGTCGCGGAATTCAGCGGGATCGACAAGATCACCGGCCGCATCACCAATTTCG ACGTCTATATGGACGAGACTGTGCAGTTCGGCGCGCTACAGGTCACGCCGCGCGTTTGCTACAGTTCGCCGGAAACGGAA GAGCCGAAGACGGACGCTTTCGTCGAGGTGAACGAAATCACGCTTGACCGGCAGATCCGGCGCATCTTTACCGGCTGGAT GTTTGCCGAAAGTCCGGGTGTCAACGCGATCGAGCATGCGGTGTACGACGTGTGGCTGAAGAGCTGCAAGCAGAACTCCG ACGTGCCGCCGCCGGCGACGAACTAG
Upstream 100 bases:
>100_bases TTACGATGCGTGGACGCCGGGTGGCTGAGCAAATTTATCGCCACATTTGCACAATAACCCGGAGTGTGATCGATCAATCC GGGCAAGGGACGGGAAGCAC
Downstream 100 bases:
>100_bases CTCCTTTTCCCTTCAGAATTTCGCCGTTTCTTCCAGCGCTTCGGCGAGCATCTGTTCGTAGCGCCTGCGTGGGACGTCGA TCGCCCCGAAGCGCCTCAGG
Product: cellulase-like protein
Products: NA
Alternate protein names: Signal Peptide; Signal Peptide Protein
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MRGAKSISRDAVRTAAAAMAAVFLAFPAHAERIKNPVAEFSGIDKITGRITNFDVYMDETVQFGALQVTPRVCYSSPETE EPKTDAFVEVNEITLDRQIRRIFTGWMFAESPGVNAIEHAVYDVWLKSCKQNSDVPPPATN
Sequences:
>Translated_141_residues MRGAKSISRDAVRTAAAAMAAVFLAFPAHAERIKNPVAEFSGIDKITGRITNFDVYMDETVQFGALQVTPRVCYSSPETE EPKTDAFVEVNEITLDRQIRRIFTGWMFAESPGVNAIEHAVYDVWLKSCKQNSDVPPPATN >Mature_141_residues MRGAKSISRDAVRTAAAAMAAVFLAFPAHAERIKNPVAEFSGIDKITGRITNFDVYMDETVQFGALQVTPRVCYSSPETE EPKTDAFVEVNEITLDRQIRRIFTGWMFAESPGVNAIEHAVYDVWLKSCKQNSDVPPPATN
Specific function: Unknown
COG id: COG4765
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15610; Mature: 15610
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGAKSISRDAVRTAAAAMAAVFLAFPAHAERIKNPVAEFSGIDKITGRITNFDVYMDET CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCEECCEEEEECCC VQFGALQVTPRVCYSSPETEEPKTDAFVEVNEITLDRQIRRIFTGWMFAESPGVNAIEHA CCCCEEEECHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH VYDVWLKSCKQNSDVPPPATN HHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRGAKSISRDAVRTAAAAMAAVFLAFPAHAERIKNPVAEFSGIDKITGRITNFDVYMDET CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCEECCEEEEECCC VQFGALQVTPRVCYSSPETEEPKTDAFVEVNEITLDRQIRRIFTGWMFAESPGVNAIEHA CCCCEEEECHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH VYDVWLKSCKQNSDVPPPATN HHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA