| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633957
Identifier: 110633957
GI number: 110633957
Start: 1728094
End: 1729170
Strand: Direct
Name: 110633957
Synonym: Meso_1605
Alternate gene names: NA
Gene position: 1728094-1729170 (Clockwise)
Preceding gene: 110633956
Following gene: 110633958
Centisome position: 39.16
GC content: 60.82
Gene sequence:
>1077_bases ATGGCTCACGCTGTAAACCGTGTCGAACCGTCGCCAACTGGGAGGAATGACATGTTCAAGATTTTGATGACTGCCGCCGT GGCGGCAGCCGCCATCTCCGGTTTGACCGGTGCGGCGGTGGCCGCGGACGTTAAGCTCGCGCTCGTGCCAGGGGGTCCAC ATCCTTTCTTTGCTCCTTGGGAGCAGGCGGCAGCGGACGCCAAGAAGGATTTTGGCCTCGCCGAAGCGACGTATGCAGTG CCCCAGGAGTGGCAGCTCGACATGCAGAACAAGCTGCTCGAAAGTCTCGCGGCACAGGGCTACAACGCCTTCGGTATCTT CCCCGGAGACGCGACGGGCACAAATGAAATGATCTCCGAACTCGACTCCTTCGGCAGCCCGTCCGTCGTCATCGGCGGCT GCACGCAGAGCCCGAGTCCCGCGAAATTCTGCCTTGCCACCGACGTCTATCGTTCGGCCTATCTCGGCACGAAGGCACTC ATCGAGGCAATGGGCGGCAAGGGCAAGATCATGCACGCCGGCAGCCGGCTAGTGGACCCGAACACGCAATTGCGTATCGC CGCCATAGATAAGGCAATCGAGGAAGCCGGTCCCGACGTCACGCTCTATCAGCATGTCACCGACACAGACAGCCAAGAGA CCGGCGATGCCAAGATCAATGGCGTGCTCGCCGCCGACGCCGCCAACATCGACGGCATCATAGCCACCGGCTACGTATCC TCGGTGATCGCGGCCCGTGCGCTCGAGAACCTCAACGATGCGCGGATCAAGATGATCGGGATCGACGACGACAAGATCGT GCTCGACGCGATCGACAAGGGCGTCATCCAGGGCACCATGGCCCAGAACCCCTACGGCCAGGCCTACATCGCCGCTTATG CCTTAAAGCGCATGCATGAGGGCTGCACGATGAAGGCCGACGCGGTGTTCGACGAGAACCCGCAGAATGCGACCTTTATC GACAGCGGCACTCTGCTCATAAGCAAGGACAACCTCCAGACCTACCGCGACGAGTTGAAGAAGATCGCGGACGACATCAT TGCAGGCTTCGACGCCAAATACCTCGCCTGCAGCTGA
Upstream 100 bases:
>100_bases ATGCGCAGCTCAACCCCAGACGATTAGTGATTACTATGTGACCGCACCTTTCAAAATGTGCTTTACCTCCTGACTGACTC CCAGTAGGATGATCGGGTCG
Downstream 100 bases:
>100_bases CGCTCCGATAGTCTGCGCCTGGCGGCCTCGTGCCGCCACACGCGCCGCGCGACAAATCGAACGAGTTATTGCCGATGTTA CATGTAGCCGAATCTGGCGC
Product: sugar ABC transporter, periplasmic sugar-binding protein
Products: NA
Alternate protein names: Sugar ABC Transporter
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MAHAVNRVEPSPTGRNDMFKILMTAAVAAAAISGLTGAAVAADVKLALVPGGPHPFFAPWEQAAADAKKDFGLAEATYAV PQEWQLDMQNKLLESLAAQGYNAFGIFPGDATGTNEMISELDSFGSPSVVIGGCTQSPSPAKFCLATDVYRSAYLGTKAL IEAMGGKGKIMHAGSRLVDPNTQLRIAAIDKAIEEAGPDVTLYQHVTDTDSQETGDAKINGVLAADAANIDGIIATGYVS SVIAARALENLNDARIKMIGIDDDKIVLDAIDKGVIQGTMAQNPYGQAYIAAYALKRMHEGCTMKADAVFDENPQNATFI DSGTLLISKDNLQTYRDELKKIADDIIAGFDAKYLACS
Sequences:
>Translated_358_residues MAHAVNRVEPSPTGRNDMFKILMTAAVAAAAISGLTGAAVAADVKLALVPGGPHPFFAPWEQAAADAKKDFGLAEATYAV PQEWQLDMQNKLLESLAAQGYNAFGIFPGDATGTNEMISELDSFGSPSVVIGGCTQSPSPAKFCLATDVYRSAYLGTKAL IEAMGGKGKIMHAGSRLVDPNTQLRIAAIDKAIEEAGPDVTLYQHVTDTDSQETGDAKINGVLAADAANIDGIIATGYVS SVIAARALENLNDARIKMIGIDDDKIVLDAIDKGVIQGTMAQNPYGQAYIAAYALKRMHEGCTMKADAVFDENPQNATFI DSGTLLISKDNLQTYRDELKKIADDIIAGFDAKYLACS >Mature_357_residues AHAVNRVEPSPTGRNDMFKILMTAAVAAAAISGLTGAAVAADVKLALVPGGPHPFFAPWEQAAADAKKDFGLAEATYAVP QEWQLDMQNKLLESLAAQGYNAFGIFPGDATGTNEMISELDSFGSPSVVIGGCTQSPSPAKFCLATDVYRSAYLGTKALI EAMGGKGKIMHAGSRLVDPNTQLRIAAIDKAIEEAGPDVTLYQHVTDTDSQETGDAKINGVLAADAANIDGIIATGYVSS VIAARALENLNDARIKMIGIDDDKIVLDAIDKGVIQGTMAQNPYGQAYIAAYALKRMHEGCTMKADAVFDENPQNATFID SGTLLISKDNLQTYRDELKKIADDIIAGFDAKYLACS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37770; Mature: 37639
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHAVNRVEPSPTGRNDMFKILMTAAVAAAAISGLTGAAVAADVKLALVPGGPHPFFAPW CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEECEEEEEECCCCCCCCCCH EQAAADAKKDFGLAEATYAVPQEWQLDMQNKLLESLAAQGYNAFGIFPGDATGTNEMISE HHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH LDSFGSPSVVIGGCTQSPSPAKFCLATDVYRSAYLGTKALIEAMGGKGKIMHAGSRLVDP HHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECC NTQLRIAAIDKAIEEAGPDVTLYQHVTDTDSQETGDAKINGVLAADAANIDGIIATGYVS CCCEEEHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCEEEHHHHH SVIAARALENLNDARIKMIGIDDDKIVLDAIDKGVIQGTMAQNPYGQAYIAAYALKRMHE HHHHHHHHHCCCCCEEEEEECCCCCEEHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHC GCTMKADAVFDENPQNATFIDSGTLLISKDNLQTYRDELKKIADDIIAGFDAKYLACS CCCEEECCEECCCCCCCEEEECCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEECC >Mature Secondary Structure AHAVNRVEPSPTGRNDMFKILMTAAVAAAAISGLTGAAVAADVKLALVPGGPHPFFAPW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEECEEEEEECCCCCCCCCCH EQAAADAKKDFGLAEATYAVPQEWQLDMQNKLLESLAAQGYNAFGIFPGDATGTNEMISE HHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH LDSFGSPSVVIGGCTQSPSPAKFCLATDVYRSAYLGTKALIEAMGGKGKIMHAGSRLVDP HHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECC NTQLRIAAIDKAIEEAGPDVTLYQHVTDTDSQETGDAKINGVLAADAANIDGIIATGYVS CCCEEEHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCEEEHHHHH SVIAARALENLNDARIKMIGIDDDKIVLDAIDKGVIQGTMAQNPYGQAYIAAYALKRMHE HHHHHHHHHCCCCCEEEEEECCCCCEEHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHC GCTMKADAVFDENPQNATFIDSGTLLISKDNLQTYRDELKKIADDIIAGFDAKYLACS CCCEEECCEECCCCCCCEEEECCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA