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The map label for this gene is glxA [H]

Identifier: 110633951

GI number: 110633951

Start: 1722525

End: 1723610

Strand: Reverse

Name: glxA [H]

Synonym: Meso_1599

Alternate gene names: 110633951

Gene position: 1723610-1722525 (Counterclockwise)

Preceding gene: 110633964

Following gene: 110633930

Centisome position: 39.06

GC content: 61.05

Gene sequence:

>1086_bases
ATGCAACTCGACATCGCAGCCTCCAGAAGTGAGCCGGTCCATGTGAGCCTCGTCGCCATCCCCGAGGCCGTTATCTCAAC
GCTCTCCGGCATCTTCGACGTGATCAACGGCCCTGCCCTGATGCAGACCTCCGGTGATGAACTCCCGAAGCCCTTTCGGG
TGGAGATTGTGGGGCTTCGGGAAGGCCCACTGGAACTCGCCAGCGGTGTGCCTGTGACCGCGCATCGAAGCGTTGCGGAG
GTTGAGGCCACCGACATCGTCATCGTTCCCTCAATCCTGCTGGGGCCGGAAGGCTGGCAAAAAGGGCGGTACCCAGAGCT
CGTTGACTGGTGTCGCGCGATGCACGAGCGCGGTGCTCTTCTCTGCTCCGCCTGCTCCGGCATATTTCTGCTCGCCGAGA
CCGGCCTCTTCGACGGAGTGGATGCGACGGTGCACTATGGCTACGCCCGTACGTTCGCTTCCTCCTTCCCCGACGTATGC
ATTCACCCGGAGCGGGTGCTCGTTGTTTCCGGCAAACGGGAGGAGCTGATTACCTCTGGCGCGTCCATGACATGGCATGA
TCTCGTGCTATACCTGATTGCCCGCCACGCGGGGACGACGGTGGCGCAGGACGTCGCGCGCTTTTTTGCGCTGCAATGGC
ATCAGGACGGGCTTGCGCCCTACATCGTCTTCGAAGGCCGCAAGAACCATGGCGATCTGGCGATCCAGGCCGCCCAGGAC
TGGGTCGCCACCCATTTCTCGGTCGTCAATCCTATCGAAGAAATGATCCGACGCTCAGGGCTGACGGAGCGCACCTTCAA
GCGACGATTTACGAGCGCGGCAGGGTTAAGCCCGATCACATATGTGCAACGACTGAGAATAGAAGATGCCAAACGCCGGC
TCGAGCGCACGGAAGTCTCCGTGGACGAGATCAGTTGGCAGGTCGGCTACGAGGAACCGGCGTTTTTCCGACGCCTCTTC
AAGCGCTTCACGGGATTGGCACCCGGAGCGTACCGTCGTCGCTTCAAAATTCCTGACTATGCTAGACCGAACACGCAACC
GGTGCGTTCGACAAATGGCTTGTCGGAGGGATCGGCTGCCGGCTGA

Upstream 100 bases:

>100_bases
AGATTTTCCAGAATCGGGCTGTTTCTGCCACTCGGCAGCAATCATTTATGTTTGGCGCAGCAGCTTTCTCGGAGGTATTC
TCGCCACAAGGGCAACCGCC

Downstream 100 bases:

>100_bases
ACATGGGCATCCTGATCTCCAGACGCGAAAAAGACGCACTAGACGAGTGTTTTTGGCAGTGGGGAGTCAGCGCTTTGCGT
TGTTGTTCTGGGAGGTGCTC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MQLDIAASRSEPVHVSLVAIPEAVISTLSGIFDVINGPALMQTSGDELPKPFRVEIVGLREGPLELASGVPVTAHRSVAE
VEATDIVIVPSILLGPEGWQKGRYPELVDWCRAMHERGALLCSACSGIFLLAETGLFDGVDATVHYGYARTFASSFPDVC
IHPERVLVVSGKREELITSGASMTWHDLVLYLIARHAGTTVAQDVARFFALQWHQDGLAPYIVFEGRKNHGDLAIQAAQD
WVATHFSVVNPIEEMIRRSGLTERTFKRRFTSAAGLSPITYVQRLRIEDAKRRLERTEVSVDEISWQVGYEEPAFFRRLF
KRFTGLAPGAYRRRFKIPDYARPNTQPVRSTNGLSEGSAAG

Sequences:

>Translated_361_residues
MQLDIAASRSEPVHVSLVAIPEAVISTLSGIFDVINGPALMQTSGDELPKPFRVEIVGLREGPLELASGVPVTAHRSVAE
VEATDIVIVPSILLGPEGWQKGRYPELVDWCRAMHERGALLCSACSGIFLLAETGLFDGVDATVHYGYARTFASSFPDVC
IHPERVLVVSGKREELITSGASMTWHDLVLYLIARHAGTTVAQDVARFFALQWHQDGLAPYIVFEGRKNHGDLAIQAAQD
WVATHFSVVNPIEEMIRRSGLTERTFKRRFTSAAGLSPITYVQRLRIEDAKRRLERTEVSVDEISWQVGYEEPAFFRRLF
KRFTGLAPGAYRRRFKIPDYARPNTQPVRSTNGLSEGSAAG
>Mature_361_residues
MQLDIAASRSEPVHVSLVAIPEAVISTLSGIFDVINGPALMQTSGDELPKPFRVEIVGLREGPLELASGVPVTAHRSVAE
VEATDIVIVPSILLGPEGWQKGRYPELVDWCRAMHERGALLCSACSGIFLLAETGLFDGVDATVHYGYARTFASSFPDVC
IHPERVLVVSGKREELITSGASMTWHDLVLYLIARHAGTTVAQDVARFFALQWHQDGLAPYIVFEGRKNHGDLAIQAAQD
WVATHFSVVNPIEEMIRRSGLTERTFKRRFTSAAGLSPITYVQRLRIEDAKRRLERTEVSVDEISWQVGYEEPAFFRRLF
KRFTGLAPGAYRRRFKIPDYARPNTQPVRSTNGLSEGSAAG

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787987, Length=67, Percent_Identity=49.2537313432836, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 39946; Mature: 39946

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLDIAASRSEPVHVSLVAIPEAVISTLSGIFDVINGPALMQTSGDELPKPFRVEIVGLR
CCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEEEC
EGPLELASGVPVTAHRSVAEVEATDIVIVPSILLGPEGWQKGRYPELVDWCRAMHERGAL
CCCHHHHCCCCCCCCCCHHHHCCCCEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHCCCE
LCSACSGIFLLAETGLFDGVDATVHYGYARTFASSFPDVCIHPERVLVVSGKREELITSG
EEHHHCCEEEEEECCCCCCCCHHEEHHHHHHHHHCCCCEEECCCEEEEECCCHHHHHHCC
ASMTWHDLVLYLIARHAGTTVAQDVARFFALQWHQDGLAPYIVFEGRKNHGDLAIQAAQD
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEHHHH
WVATHFSVVNPIEEMIRRSGLTERTFKRRFTSAAGLSPITYVQRLRIEDAKRRLERTEVS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
VDEISWQVGYEEPAFFRRLFKRFTGLAPGAYRRRFKIPDYARPNTQPVRSTNGLSEGSAA
HHHHEEECCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
G
C
>Mature Secondary Structure
MQLDIAASRSEPVHVSLVAIPEAVISTLSGIFDVINGPALMQTSGDELPKPFRVEIVGLR
CCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEEEC
EGPLELASGVPVTAHRSVAEVEATDIVIVPSILLGPEGWQKGRYPELVDWCRAMHERGAL
CCCHHHHCCCCCCCCCCHHHHCCCCEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHCCCE
LCSACSGIFLLAETGLFDGVDATVHYGYARTFASSFPDVCIHPERVLVVSGKREELITSG
EEHHHCCEEEEEECCCCCCCCHHEEHHHHHHHHHCCCCEEECCCEEEEECCCHHHHHHCC
ASMTWHDLVLYLIARHAGTTVAQDVARFFALQWHQDGLAPYIVFEGRKNHGDLAIQAAQD
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEHHHH
WVATHFSVVNPIEEMIRRSGLTERTFKRRFTSAAGLSPITYVQRLRIEDAKRRLERTEVS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
VDEISWQVGYEEPAFFRRLFKRFTGLAPGAYRRRFKIPDYARPNTQPVRSTNGLSEGSAA
HHHHEEECCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]