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The map label for this gene is ycjO [C]

Identifier: 110633946

GI number: 110633946

Start: 1716907

End: 1717773

Strand: Direct

Name: ycjO [C]

Synonym: Meso_1594

Alternate gene names: 110633946

Gene position: 1716907-1717773 (Clockwise)

Preceding gene: 110633945

Following gene: 110633947

Centisome position: 38.91

GC content: 59.05

Gene sequence:

>867_bases
ATGAAGACCTGGAACAACAAGGCCTGGTTCATGGTGCTCCCGGTGCTGGCGCTGGTGGCCTTCTCGGCCGTCATTCCACT
GATGACGGTGGTCAACTACTCAGTGCAGGACACGTTTGGAAACAACGTCTTCTTTTGGGCGGGGACGGAGTGGTTCGAGG
AGGTCCTGGCTTCCGACCGCTTCTGGGCCGCCATGGGCCGCAATCTCGCCTTCTCCGCGATCATCCTCGCCATTGAGGTG
CCGCTCGGCATCTTCATCGCGCTCAACATGCCGCGCAGGGGATGGGGTGTGCCGGTTTGCCTGGTTTTCATGGCGCTGCC
GCTGCTCATACCCTTTAACGTGGTGGGCACGATCTGGCAGGTCTTCGGGCGCATCGATATTGGCCTGCTGGGACGGGGAC
TTTACGCCCTTGGCCTCGATTACAACTATGTCAACGATCCAATCGACGCGTGGGTGACGATCATCCTGATGGATGTCTGG
CACTGGACAAGCCTCGTCGTGCTCTTGTGTTACGCCGGCCTCGTCTCGATCCCGGACGCTTATTATCAGGCGGCCAAAAT
CGACGGCGCGTCCCGCTGGGCGGTGTTCCGCTACATCCAGCTGCCCAAGATGCACCGGGTGCTGCTCATAGCCATCCTGC
TGCGATTCATGGACTCCTTCATGATCTACACGGAGCCGTTCGTGCTCACGGGTGGCGGGCCTGGCAACACCACCACATTC
CTGTCCATCGACCTGGTGAAGCTCGCCATCGGCGAATTCAATCTCGGCGAGGCGGCGGCCATGTCGATCATCTACTTCCT
GATCATTCTTTTGATGTCATGGGTCTTCTACACGGTCATGACCAATTACGGCACGGAGAAGGGCTGA

Upstream 100 bases:

>100_bases
GTGAGGATGCGGAGGTGCCGGCGGAGCCGCATGTCATCTTCGATCCTGCCCACCTCAATCTCTATGCCGATTCCTGGCGC
GTGGATATGGAAGGCCGGCC

Downstream 100 bases:

>100_bases
TGGCGGCGGGCAAGAACAGCACCGCTGCGGCGGATACGATCGCGATGCGGCGGACCACTGCCGCGGCGGCGGTAGGCGAG
GCACAGGCCGAGATCGGCCA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKTWNNKAWFMVLPVLALVAFSAVIPLMTVVNYSVQDTFGNNVFFWAGTEWFEEVLASDRFWAAMGRNLAFSAIILAIEV
PLGIFIALNMPRRGWGVPVCLVFMALPLLIPFNVVGTIWQVFGRIDIGLLGRGLYALGLDYNYVNDPIDAWVTIILMDVW
HWTSLVVLLCYAGLVSIPDAYYQAAKIDGASRWAVFRYIQLPKMHRVLLIAILLRFMDSFMIYTEPFVLTGGGPGNTTTF
LSIDLVKLAIGEFNLGEAAAMSIIYFLIILLMSWVFYTVMTNYGTEKG

Sequences:

>Translated_288_residues
MKTWNNKAWFMVLPVLALVAFSAVIPLMTVVNYSVQDTFGNNVFFWAGTEWFEEVLASDRFWAAMGRNLAFSAIILAIEV
PLGIFIALNMPRRGWGVPVCLVFMALPLLIPFNVVGTIWQVFGRIDIGLLGRGLYALGLDYNYVNDPIDAWVTIILMDVW
HWTSLVVLLCYAGLVSIPDAYYQAAKIDGASRWAVFRYIQLPKMHRVLLIAILLRFMDSFMIYTEPFVLTGGGPGNTTTF
LSIDLVKLAIGEFNLGEAAAMSIIYFLIILLMSWVFYTVMTNYGTEKG
>Mature_288_residues
MKTWNNKAWFMVLPVLALVAFSAVIPLMTVVNYSVQDTFGNNVFFWAGTEWFEEVLASDRFWAAMGRNLAFSAIILAIEV
PLGIFIALNMPRRGWGVPVCLVFMALPLLIPFNVVGTIWQVFGRIDIGLLGRGLYALGLDYNYVNDPIDAWVTIILMDVW
HWTSLVVLLCYAGLVSIPDAYYQAAKIDGASRWAVFRYIQLPKMHRVLLIAILLRFMDSFMIYTEPFVLTGGGPGNTTTF
LSIDLVKLAIGEFNLGEAAAMSIIYFLIILLMSWVFYTVMTNYGTEKG

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=247, Percent_Identity=23.4817813765182, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1789861, Length=225, Percent_Identity=27.1111111111111, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32388; Mature: 32388

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTWNNKAWFMVLPVLALVAFSAVIPLMTVVNYSVQDTFGNNVFFWAGTEWFEEVLASDR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEECCHHHHHHHHCCCH
FWAAMGRNLAFSAIILAIEVPLGIFIALNMPRRGWGVPVCLVFMALPLLIPFNVVGTIWQ
HHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VFGRIDIGLLGRGLYALGLDYNYVNDPIDAWVTIILMDVWHWTSLVVLLCYAGLVSIPDA
HHHCCCHHHHCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
YYQAAKIDGASRWAVFRYIQLPKMHRVLLIAILLRFMDSFMIYTEPFVLTGGGPGNTTTF
HHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCEEEECCCCCCCEEE
LSIDLVKLAIGEFNLGEAAAMSIIYFLIILLMSWVFYTVMTNYGTEKG
EEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKTWNNKAWFMVLPVLALVAFSAVIPLMTVVNYSVQDTFGNNVFFWAGTEWFEEVLASDR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEECCHHHHHHHHCCCH
FWAAMGRNLAFSAIILAIEVPLGIFIALNMPRRGWGVPVCLVFMALPLLIPFNVVGTIWQ
HHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VFGRIDIGLLGRGLYALGLDYNYVNDPIDAWVTIILMDVWHWTSLVVLLCYAGLVSIPDA
HHHCCCHHHHCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
YYQAAKIDGASRWAVFRYIQLPKMHRVLLIAILLRFMDSFMIYTEPFVLTGGGPGNTTTF
HHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCEEEECCCCCCCEEE
LSIDLVKLAIGEFNLGEAAAMSIIYFLIILLMSWVFYTVMTNYGTEKG
EEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]