| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633929
Identifier: 110633929
GI number: 110633929
Start: 1696311
End: 1698467
Strand: Direct
Name: 110633929
Synonym: Meso_1577
Alternate gene names: NA
Gene position: 1696311-1698467 (Clockwise)
Preceding gene: 110633927
Following gene: 110633931
Centisome position: 38.44
GC content: 54.1
Gene sequence:
>2157_bases ATGCCGCTTCCCGCCCGTTCGCTTTCCTTGCCGTGCATCTCCTCAGTTGGAGGCACACAGCCATTGCCGGCTCCCGGCCC TCTACGCCTCCATAAGTCAATGGAAATCCTGCCCGCACAGCCAGCAGCGCCTCAGGGCGCGCCGCAGACGACTCTCTGCC GCCCGGCATTTCCAGGAGTTTCAGGCGCTCTGAGTCTGGAATCTTTGCCGCCGACGAAGCTGCTCGACACCCTGTCTACC GCAAGACGGGAAAACCGATCTTTGGTGCCGCTGATCAATGCGCGGATTGAACGCCTGCTGAAAGCAGCAGACCTTTCAAG GCAGGTTCCCTTTAAAAGCAGATATAACAACAGCTTATATAAAATAGAGGGAAGCGAAATCCCGATTGTCATGAAGAGGA TGCAATCTCCGAAGGCAGCCTTTCTGGAGGAATTGGCATATCGGGTTAGCGAGAAACTGGGAGTCCATCTCGTTCCTCCC ACCATAGCAAGAAAAAGATCTATTCTTCAGCCCTTGTTAGAAGGATACACCGAAGAAAAGAAAATCTCCGCAAGCGAGAA AAAAGTGCGCGGAGTAGAAATTCCGGGCAATGCCAAGCTGTTTTATTATCTGGTCAATCAGCTTGACGACAATCAAGGCA ATCGCATGTGGAGCGGCGATGCGACTTTGATGCTCATAGACCATGAAAATACCTTCTCCCCGCGAAGCTCGGCCACGCAT GAGAGCGCTATTCGAAACATACGCATGGATGAGGTATTTACCGACGAGACATGGCGGCGTTTCCTATCGATCCCGGCTTC GGAGTGGCGCGCACTCTGCCACACAGAACACCTGTCATTGTCCGATGACGCGATAGCAGGATTTTTATCGCGCATTGAGC ACGTCAAGGATCTAGCCCAGAGGCAGATTAAGTCTGGTGTGATTGGTCTTTCTGATCCGAGCCGCGCTGCCGCGCGCGCA GAGTCCATTCTGAGGGAGTTTGAACTTCGCGCTAACCCTCAGGGTAGCACCTCTTTCCTGGCGGGCGATGCATTGCAAAT TCTTGAAGCCGGTTATCAGAACTTCTTGAAGGGACGATCTCGCATCGTTGAAAAGCTGAAGGCATCGCGCGACGCTGCTT TGGAACCATTGCTGCAGGAGATCAAAAGCCTGCGGGCTGAAGCAGCCAGGCTGAAGCCTGAAAAGACGAGGCTGAAGTCA GAATTGACCATGGCCAATCGGACGGGATTTTGGAATTGGGTTCGGGTCAAGGTTCAGCGAGAACCCGAACTGGAGGCTGA ACGGAGCTATCGCGAGATTAAATCATCGCTGAAGCATCAAGAGCGCCGGATCGTTGAGCTGGAAAATCGCCTTGGCTGGA TAGTCGATGATTACAGGCGGAAAGAGGACAGAGAGAGCGATGCTCTGAGGCGTTCCACCGCGGATGGTATGCGCCATGCA TTGCTTGAGAAGGGTGTGTATGTTGAGGAGCCAGCCAAAGAAAATGATGCCGTTGAACGCTTCCTGAATTCAAGGGAGGC GTCAAAGATCATCGACCGATCCATCACCTCACGATTTGGGCTTCCCGACAGAGAAAAGTCTATAAGGAACGCCGTTAAGG AGCTGCGGGGGGCATTGGCGCAGCAGCCCTTCTATCTGGAAAAGCGTAGAGTATTGCAGCAGGTGCGTAGCGGGTCGTCG CTGAATGACGATTTTCTCACCGCAAATGTGTCGGCGAAGGTGACGACTTACGCTCAACGTTGCATCGAGAGGCGGATATC CGACATCCGGCGGGAAAGCATTTTTGCGCAACTGGCACGCGAGAATGCCGAGTTTGATGCCAAGAGAGCTCAACGTGCGG AAGAAGGCGAGGCACTTCGAATCGCTCGATGGAAAGCGGATCAAGAAGCGTTTGCGTCGAGATCGACGAGGGCGAACGAG GCCGCGATCGAGGTGAAACCCACTCCCAGCCGTGCTGCGGCGGCGCCGATTTCCTCAGCTCCCTCAGTCCCTGCAACCGG CGAGCGGAGTCATAAAAGGAAAGCTTCTATTTCGTCCTCGATGATCGATCGCGAAATAGAGGATTTACGCGCAAGCTATG CTCTCCACGGTGAGGGCTCGATCACTACCGAAGCGAGCGACTTGGCCCGGAATTGGATAGGGGCGGATCAAAAATAG
Upstream 100 bases:
>100_bases GCACGATCCTACCGATAAATGCTGCTCAATTCCAAAATCCCTATTAGAGGCTCTGGTTATCCGATGGCATGTAGAACCGG CCCCACAAGGATTTTCTGCC
Downstream 100 bases:
>100_bases CAAGAGGTATAGCCTGCCACCGATATCATCAGCGCCGCGGCTTTTGCCGCGATAGAAGATGCCCGGGTGCACGCAAGGCA CCCAGGCACTTACAAAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 718; Mature: 717
Protein sequence:
>718_residues MPLPARSLSLPCISSVGGTQPLPAPGPLRLHKSMEILPAQPAAPQGAPQTTLCRPAFPGVSGALSLESLPPTKLLDTLST ARRENRSLVPLINARIERLLKAADLSRQVPFKSRYNNSLYKIEGSEIPIVMKRMQSPKAAFLEELAYRVSEKLGVHLVPP TIARKRSILQPLLEGYTEEKKISASEKKVRGVEIPGNAKLFYYLVNQLDDNQGNRMWSGDATLMLIDHENTFSPRSSATH ESAIRNIRMDEVFTDETWRRFLSIPASEWRALCHTEHLSLSDDAIAGFLSRIEHVKDLAQRQIKSGVIGLSDPSRAAARA ESILREFELRANPQGSTSFLAGDALQILEAGYQNFLKGRSRIVEKLKASRDAALEPLLQEIKSLRAEAARLKPEKTRLKS ELTMANRTGFWNWVRVKVQREPELEAERSYREIKSSLKHQERRIVELENRLGWIVDDYRRKEDRESDALRRSTADGMRHA LLEKGVYVEEPAKENDAVERFLNSREASKIIDRSITSRFGLPDREKSIRNAVKELRGALAQQPFYLEKRRVLQQVRSGSS LNDDFLTANVSAKVTTYAQRCIERRISDIRRESIFAQLARENAEFDAKRAQRAEEGEALRIARWKADQEAFASRSTRANE AAIEVKPTPSRAAAAPISSAPSVPATGERSHKRKASISSSMIDREIEDLRASYALHGEGSITTEASDLARNWIGADQK
Sequences:
>Translated_718_residues MPLPARSLSLPCISSVGGTQPLPAPGPLRLHKSMEILPAQPAAPQGAPQTTLCRPAFPGVSGALSLESLPPTKLLDTLST ARRENRSLVPLINARIERLLKAADLSRQVPFKSRYNNSLYKIEGSEIPIVMKRMQSPKAAFLEELAYRVSEKLGVHLVPP TIARKRSILQPLLEGYTEEKKISASEKKVRGVEIPGNAKLFYYLVNQLDDNQGNRMWSGDATLMLIDHENTFSPRSSATH ESAIRNIRMDEVFTDETWRRFLSIPASEWRALCHTEHLSLSDDAIAGFLSRIEHVKDLAQRQIKSGVIGLSDPSRAAARA ESILREFELRANPQGSTSFLAGDALQILEAGYQNFLKGRSRIVEKLKASRDAALEPLLQEIKSLRAEAARLKPEKTRLKS ELTMANRTGFWNWVRVKVQREPELEAERSYREIKSSLKHQERRIVELENRLGWIVDDYRRKEDRESDALRRSTADGMRHA LLEKGVYVEEPAKENDAVERFLNSREASKIIDRSITSRFGLPDREKSIRNAVKELRGALAQQPFYLEKRRVLQQVRSGSS LNDDFLTANVSAKVTTYAQRCIERRISDIRRESIFAQLARENAEFDAKRAQRAEEGEALRIARWKADQEAFASRSTRANE AAIEVKPTPSRAAAAPISSAPSVPATGERSHKRKASISSSMIDREIEDLRASYALHGEGSITTEASDLARNWIGADQK >Mature_717_residues PLPARSLSLPCISSVGGTQPLPAPGPLRLHKSMEILPAQPAAPQGAPQTTLCRPAFPGVSGALSLESLPPTKLLDTLSTA RRENRSLVPLINARIERLLKAADLSRQVPFKSRYNNSLYKIEGSEIPIVMKRMQSPKAAFLEELAYRVSEKLGVHLVPPT IARKRSILQPLLEGYTEEKKISASEKKVRGVEIPGNAKLFYYLVNQLDDNQGNRMWSGDATLMLIDHENTFSPRSSATHE SAIRNIRMDEVFTDETWRRFLSIPASEWRALCHTEHLSLSDDAIAGFLSRIEHVKDLAQRQIKSGVIGLSDPSRAAARAE SILREFELRANPQGSTSFLAGDALQILEAGYQNFLKGRSRIVEKLKASRDAALEPLLQEIKSLRAEAARLKPEKTRLKSE LTMANRTGFWNWVRVKVQREPELEAERSYREIKSSLKHQERRIVELENRLGWIVDDYRRKEDRESDALRRSTADGMRHAL LEKGVYVEEPAKENDAVERFLNSREASKIIDRSITSRFGLPDREKSIRNAVKELRGALAQQPFYLEKRRVLQQVRSGSSL NDDFLTANVSAKVTTYAQRCIERRISDIRRESIFAQLARENAEFDAKRAQRAEEGEALRIARWKADQEAFASRSTRANEA AIEVKPTPSRAAAAPISSAPSVPATGERSHKRKASISSSMIDREIEDLRASYALHGEGSITTEASDLARNWIGADQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80602; Mature: 80470
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPARSLSLPCISSVGGTQPLPAPGPLRLHKSMEILPAQPAAPQGAPQTTLCRPAFPGV CCCCCCCCCCCHHHCCCCCCCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC SGALSLESLPPTKLLDTLSTARRENRSLVPLINARIERLLKAADLSRQVPFKSRYNNSLY CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEE KIEGSEIPIVMKRMQSPKAAFLEELAYRVSEKLGVHLVPPTIARKRSILQPLLEGYTEEK EECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHCCCHHH KISASEKKVRGVEIPGNAKLFYYLVNQLDDNQGNRMWSGDATLMLIDHENTFSPRSSATH HCCCHHHHCCCEECCCCCEEHHHHHHHHCCCCCCEEECCCEEEEEEECCCCCCCCCCCHH ESAIRNIRMDEVFTDETWRRFLSIPASEWRALCHTEHLSLSDDAIAGFLSRIEHVKDLAQ HHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RQIKSGVIGLSDPSRAAARAESILREFELRANPQGSTSFLAGDALQILEAGYQNFLKGRS HHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RIVEKLKASRDAALEPLLQEIKSLRAEAARLKPEKTRLKSELTMANRTGFWNWVRVKVQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEEC EPELEAERSYREIKSSLKHQERRIVELENRLGWIVDDYRRKEDRESDALRRSTADGMRHA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLEKGVYVEEPAKENDAVERFLNSREASKIIDRSITSRFGLPDREKSIRNAVKELRGALA HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH QQPFYLEKRRVLQQVRSGSSLNDDFLTANVSAKVTTYAQRCIERRISDIRRESIFAQLAR CCCHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENAEFDAKRAQRAEEGEALRIARWKADQEAFASRSTRANEAAIEVKPTPSRAAAAPISSA HCCCHHHHHHHHCCCCCEEEEEHHCCCHHHHHHCCCCCCCCEEEECCCCCHHHCCCCCCC PSVPATGERSHKRKASISSSMIDREIEDLRASYALHGEGSITTEASDLARNWIGADQK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHCCCCCC >Mature Secondary Structure PLPARSLSLPCISSVGGTQPLPAPGPLRLHKSMEILPAQPAAPQGAPQTTLCRPAFPGV CCCCCCCCCCHHHCCCCCCCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC SGALSLESLPPTKLLDTLSTARRENRSLVPLINARIERLLKAADLSRQVPFKSRYNNSLY CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEE KIEGSEIPIVMKRMQSPKAAFLEELAYRVSEKLGVHLVPPTIARKRSILQPLLEGYTEEK EECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHCCCHHH KISASEKKVRGVEIPGNAKLFYYLVNQLDDNQGNRMWSGDATLMLIDHENTFSPRSSATH HCCCHHHHCCCEECCCCCEEHHHHHHHHCCCCCCEEECCCEEEEEEECCCCCCCCCCCHH ESAIRNIRMDEVFTDETWRRFLSIPASEWRALCHTEHLSLSDDAIAGFLSRIEHVKDLAQ HHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RQIKSGVIGLSDPSRAAARAESILREFELRANPQGSTSFLAGDALQILEAGYQNFLKGRS HHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RIVEKLKASRDAALEPLLQEIKSLRAEAARLKPEKTRLKSELTMANRTGFWNWVRVKVQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEEC EPELEAERSYREIKSSLKHQERRIVELENRLGWIVDDYRRKEDRESDALRRSTADGMRHA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLEKGVYVEEPAKENDAVERFLNSREASKIIDRSITSRFGLPDREKSIRNAVKELRGALA HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH QQPFYLEKRRVLQQVRSGSSLNDDFLTANVSAKVTTYAQRCIERRISDIRRESIFAQLAR CCCHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENAEFDAKRAQRAEEGEALRIARWKADQEAFASRSTRANEAAIEVKPTPSRAAAAPISSA HCCCHHHHHHHHCCCCCEEEEEHHCCCHHHHHHCCCCCCCCEEEECCCCCHHHCCCCCCC PSVPATGERSHKRKASISSSMIDREIEDLRASYALHGEGSITTEASDLARNWIGADQK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA