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The map label for this gene is 110633925

Identifier: 110633925

GI number: 110633925

Start: 1693067

End: 1694218

Strand: Direct

Name: 110633925

Synonym: Meso_1572

Alternate gene names: NA

Gene position: 1693067-1694218 (Clockwise)

Preceding gene: 110633924

Following gene: 110633927

Centisome position: 38.37

GC content: 59.38

Gene sequence:

>1152_bases
ATGCGATTCAGTCATCTTGCATACTCATTTGTGGTTTTCCCATTTATCGTCGGCAGCGCTCAAGCCGGAGGGTTCTCGCG
AGGCACCGCGGATACGGACATCCTCTTCGAGGAGGGGAACGTCAATTTCCGTGCTGGGGCCTATATTGCCGTGCCCCATC
AGGAATATCGCGCCGCACCGCTGGCGGCTCCCAATCCGGCGCTAATCGGCGAAAATTACCTTGACACCTATGTCATCCCG
TCGGCGGCCGTAAAGTTCGGCGTCGATGACAAGTTTGCATGCGCGGGAACCTATACGGATTCCAATGGCGCCAGCTCCAG
CTTCGCGGTCCCTTACGGCGTTAGCGGTAAGCTATCGGAGTCCTTCATCGTGACCGAGTTCGGCGCAACGTGCGCCGCGT
TCTTCGACATGGGTCGAGGGCGCCTCTCGCTGTTGGGGGGAGCCTTTATCGAAAAGCTCGATTACACCCTTGATGCGCTA
CCCACTTTGCCCGGCTTGGGACCAGTCCCGATGGAGATCGGCCTCGACAGCGACGCTTATGGCTGGCGCGCCGGTATCGG
CTATGAGATTCCGGATATCGCCCTTCGCGCGCAGCTTCTTTATCGCTCTGGCACAACTCACAATGCCACCGGCTCCGGCG
GAACACCCCTTATTCCCGGGGCCGAGCTGCCGGCTTTTGCCACGGGTGAACTACCGCAAAGCGTGGAATTGAGGCTTCAA
TCCGGCATTGCGCCAGGGTGGCTGGCTTTCGGTTCGGTCAAATGGACAGATTGGTCTGTCAACGAGACGCTTGACCTCTC
TGTTTCGACCGGCATTCCCGGCATCGGCGACTTGAAAAGCCGGAACGAATATTACTGGCGGGATGGCTGGACGATTACCG
GCGGCGTTGGGCACGCCTTCAACGAAAGAGTGTCGGGCCTTGTCAGTCTCCAGTGGGACCGCGGCGTGAGTACCGGCTAT
GACCTGCGCAAGGACAAATGGCTGCTTGCCGCAGGCGCCAGCCTAAAGGATCAGTGGGGCGGCGAATTGCGGCTTGGAGG
CGGCATCTCCTATCTCTCCTCCGCCGAAATCACTGAAGGCGTTGAAACCGGTGCCGCGGTGGATGCGGGCTGGGCTGCAC
TCTTTTCCGCCAGTTACAGCGTTAAATGGTGA

Upstream 100 bases:

>100_bases
TATTATCCTCACAAAATTTTAGTTCTCAACATCGCAAATGGCCTAATCGGTGGCCGCGCTATCATTTCGGCGATAGTGTC
GCACCAATGGAGGGGCTCGT

Downstream 100 bases:

>100_bases
CCACTGGATTGCATCTGGTGCCACCAGTCTTGGTCAGGCATCGCCGACAATCACCGTAACCCGTCCTGAGCCGCCACAAT
CCCGGCAGGGTCTACCGTCG

Product: aromatic hydrocarbon degradation membrane protein

Products: NA

Alternate protein names: Long-Chain Fatty Acid Transporter; Outer Membrane Transporter Ompp1/Fadl/dx Family; Aromatic Hydrocarbon Degradation Membrane Protein; Long-Chain Fatty Acid Protein; Outer Membrane Transporter; Outer Membrane Transporter Family Protein; OmpP1/FadL/dX Family Outer Membrane Transporter; Long-Chain Fatty Acid ABC Transporter

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MRFSHLAYSFVVFPFIVGSAQAGGFSRGTADTDILFEEGNVNFRAGAYIAVPHQEYRAAPLAAPNPALIGENYLDTYVIP
SAAVKFGVDDKFACAGTYTDSNGASSSFAVPYGVSGKLSESFIVTEFGATCAAFFDMGRGRLSLLGGAFIEKLDYTLDAL
PTLPGLGPVPMEIGLDSDAYGWRAGIGYEIPDIALRAQLLYRSGTTHNATGSGGTPLIPGAELPAFATGELPQSVELRLQ
SGIAPGWLAFGSVKWTDWSVNETLDLSVSTGIPGIGDLKSRNEYYWRDGWTITGGVGHAFNERVSGLVSLQWDRGVSTGY
DLRKDKWLLAAGASLKDQWGGELRLGGGISYLSSAEITEGVETGAAVDAGWAALFSASYSVKW

Sequences:

>Translated_383_residues
MRFSHLAYSFVVFPFIVGSAQAGGFSRGTADTDILFEEGNVNFRAGAYIAVPHQEYRAAPLAAPNPALIGENYLDTYVIP
SAAVKFGVDDKFACAGTYTDSNGASSSFAVPYGVSGKLSESFIVTEFGATCAAFFDMGRGRLSLLGGAFIEKLDYTLDAL
PTLPGLGPVPMEIGLDSDAYGWRAGIGYEIPDIALRAQLLYRSGTTHNATGSGGTPLIPGAELPAFATGELPQSVELRLQ
SGIAPGWLAFGSVKWTDWSVNETLDLSVSTGIPGIGDLKSRNEYYWRDGWTITGGVGHAFNERVSGLVSLQWDRGVSTGY
DLRKDKWLLAAGASLKDQWGGELRLGGGISYLSSAEITEGVETGAAVDAGWAALFSASYSVKW
>Mature_383_residues
MRFSHLAYSFVVFPFIVGSAQAGGFSRGTADTDILFEEGNVNFRAGAYIAVPHQEYRAAPLAAPNPALIGENYLDTYVIP
SAAVKFGVDDKFACAGTYTDSNGASSSFAVPYGVSGKLSESFIVTEFGATCAAFFDMGRGRLSLLGGAFIEKLDYTLDAL
PTLPGLGPVPMEIGLDSDAYGWRAGIGYEIPDIALRAQLLYRSGTTHNATGSGGTPLIPGAELPAFATGELPQSVELRLQ
SGIAPGWLAFGSVKWTDWSVNETLDLSVSTGIPGIGDLKSRNEYYWRDGWTITGGVGHAFNERVSGLVSLQWDRGVSTGY
DLRKDKWLLAAGASLKDQWGGELRLGGGISYLSSAEITEGVETGAAVDAGWAALFSASYSVKW

Specific function: Unknown

COG id: COG2067

COG function: function code I; Long-chain fatty acid transport protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40584; Mature: 40584

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSHLAYSFVVFPFIVGSAQAGGFSRGTADTDILFEEGNVNFRAGAYIAVPHQEYRAAP
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEECCEEEEECCHHHCCCC
LAAPNPALIGENYLDTYVIPSAAVKFGVDDKFACAGTYTDSNGASSSFAVPYGVSGKLSE
CCCCCCCCCCCCCCCEEECCCHHEEECCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCC
SFIVTEFGATCAAFFDMGRGRLSLLGGAFIEKLDYTLDALPTLPGLGPVPMEIGLDSDAY
CEEEEECCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC
GWRAGIGYEIPDIALRAQLLYRSGTTHNATGSGGTPLIPGAELPAFATGELPQSVELRLQ
CEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHH
SGIAPGWLAFGSVKWTDWSVNETLDLSVSTGIPGIGDLKSRNEYYWRDGWTITGGVGHAF
CCCCCCEEEECCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCEEECCCCHHH
NERVSGLVSLQWDRGVSTGYDLRKDKWLLAAGASLKDQWGGELRLGGGISYLSSAEITEG
HHHHCEEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHCCCEEEECCCCHHHCCCHHHHH
VETGAAVDAGWAALFSASYSVKW
HHCCCCCCCCHHHHHCCCEEECC
>Mature Secondary Structure
MRFSHLAYSFVVFPFIVGSAQAGGFSRGTADTDILFEEGNVNFRAGAYIAVPHQEYRAAP
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEECCEEEEECCHHHCCCC
LAAPNPALIGENYLDTYVIPSAAVKFGVDDKFACAGTYTDSNGASSSFAVPYGVSGKLSE
CCCCCCCCCCCCCCCEEECCCHHEEECCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCC
SFIVTEFGATCAAFFDMGRGRLSLLGGAFIEKLDYTLDALPTLPGLGPVPMEIGLDSDAY
CEEEEECCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC
GWRAGIGYEIPDIALRAQLLYRSGTTHNATGSGGTPLIPGAELPAFATGELPQSVELRLQ
CEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHH
SGIAPGWLAFGSVKWTDWSVNETLDLSVSTGIPGIGDLKSRNEYYWRDGWTITGGVGHAF
CCCCCCEEEECCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCEEECCCCHHH
NERVSGLVSLQWDRGVSTGYDLRKDKWLLAAGASLKDQWGGELRLGGGISYLSSAEITEG
HHHHCEEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHCCCEEEECCCCHHHCCCHHHHH
VETGAAVDAGWAALFSASYSVKW
HHCCCCCCCCHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA