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The map label for this gene is bepC [H]

Identifier: 110633922

GI number: 110633922

Start: 1687596

End: 1688981

Strand: Direct

Name: bepC [H]

Synonym: Meso_1569

Alternate gene names: 110633922

Gene position: 1687596-1688981 (Clockwise)

Preceding gene: 110633921

Following gene: 110633923

Centisome position: 38.25

GC content: 61.18

Gene sequence:

>1386_bases
GTGACATTCTTGCGAAGCCGTATTGTGGCTGCCTTGGCTGCGACATCTGTGATTTTGTCCCCGCTTCCGGCGAGTGCAGA
AACGATCCTCGGAGCGCTGACGAAAGCCTACCAGAACAATTCCAGCCTGAACTCATCGCGCGCGACCGTCCGCGTAACGG
ATGAAAATGTTGCGATCGCCAAATCCGGAATGCGGCCCAGGGTGAGCGGCACCGGTTCTTTGCAGCTGCAGAATCGGGAC
AGCACCGAGATTCGCACAGGGCAGTTCGGCATCTCGCTTCAACAGCCGATCTTTGATGGATTTCAGACGCATAATAACGT
GCGCGCATCCGAGGCGCAGGTTCGCGCCGCAAACGAAAGTTTGCGCAATGACGAACTGAACCTGCTTCTCAACGCCGCGA
TAGCCTATATGGATGTGATCCGCGACAGGCAGATCGCCGCGCTGCGGTCAGAAAACCTTCAATTCCTCGAAGAGCAGGTC
CGATCCGCTCGTTCGCGGCTGGATGTGGGCGAGGGCACGCGTACGGATGTGGCGCAGGCGGAAGCCAGCCGGCAATTGGC
GCTGGCCCAGCTTGCGGCGGCAAGGGCGCAGGCGGCAGCAAGTGCCGCGACCTATCGTCAGCTGGTGGGAGATGATCCGG
GAACCCTCGAGGCCCCTGAACCGCTGAGCCGATTGCTTCCGGCCGGGATCGATCAAGCCACGGCCATCGCACTTGCAGAA
CATCCGGCGATCGCGGCCAGGCTTCACCAGGTCGACGCTGCAGCCTTCAGCGTGAAGTCCGCGGAAGGTACGCTCCTGCC
CAACCTCTCTGCATCGGCCAGCCTCACGACGACCCGGACCGACACTTCCGGTGCGGCTGGCGCTGGCGGCCTTGCCGGCT
CGAACGATGGCACCCAGAACAGTGCCTCGATCGGGCTCAACCTCACAATTCCGATTTACCAGGGTGGCGAAGCTTCCGCC
CGCGTCCGGCAATCAAAGGAATCGCTTGGCAAAGCGCGGATTGACGTGGACGTTACCCGTGATCAGGTGCGACAGGCTGT
GACGTCCGCATGGACACAATATCAGGCCGCAAGGGAGGCACTGGCTGCAAACCGCGAGCAGGTGAATGCAGCCAGGCTTG
CCTTGAGCGGCGTCATCGAGGAACGCGATGTCGGTCAGCGTACGACGCTGGACGTCCTCAATTCGCAGGCCGATGTCATC
GACGCGCGCATAGAGCTTGTCAACGCGCAGCGTAACGTCGTCGTGGCGAGCTACGCTATCGTTTCTGCTATTGGGCGCCT
TTCTCCATCCAGATTGGGTCTCAACGTCGCAACCTATGACCCGCAAGAGCACTACAACGCCGTCAAGGACAAGTGGTACG
GCTTGAGGACGCCGGACGGGCGCTGA

Upstream 100 bases:

>100_bases
TATGTGGGGCGAGTCCGTCGATTTGGGGGAACACCTCCCGGCCGCTACGCCAGAAACAGCTGGACGTCACGGACGTCCGA
ATCAGGAGGTGAGGTAGGTC

Downstream 100 bases:

>100_bases
TAAACCTTCCATAACCGTTTTGCCCCGTTCTTGGTCATTTCTGTGCGAAAAGAGCGCGAACCTTCTTGCAGGGATTCTCA
CCCGCGCGTGCCTTCGCTAG

Product: TolC family type I secretion outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MTFLRSRIVAALAATSVILSPLPASAETILGALTKAYQNNSSLNSSRATVRVTDENVAIAKSGMRPRVSGTGSLQLQNRD
STEIRTGQFGISLQQPIFDGFQTHNNVRASEAQVRAANESLRNDELNLLLNAAIAYMDVIRDRQIAALRSENLQFLEEQV
RSARSRLDVGEGTRTDVAQAEASRQLALAQLAAARAQAAASAATYRQLVGDDPGTLEAPEPLSRLLPAGIDQATAIALAE
HPAIAARLHQVDAAAFSVKSAEGTLLPNLSASASLTTTRTDTSGAAGAGGLAGSNDGTQNSASIGLNLTIPIYQGGEASA
RVRQSKESLGKARIDVDVTRDQVRQAVTSAWTQYQAAREALAANREQVNAARLALSGVIEERDVGQRTTLDVLNSQADVI
DARIELVNAQRNVVVASYAIVSAIGRLSPSRLGLNVATYDPQEHYNAVKDKWYGLRTPDGR

Sequences:

>Translated_461_residues
MTFLRSRIVAALAATSVILSPLPASAETILGALTKAYQNNSSLNSSRATVRVTDENVAIAKSGMRPRVSGTGSLQLQNRD
STEIRTGQFGISLQQPIFDGFQTHNNVRASEAQVRAANESLRNDELNLLLNAAIAYMDVIRDRQIAALRSENLQFLEEQV
RSARSRLDVGEGTRTDVAQAEASRQLALAQLAAARAQAAASAATYRQLVGDDPGTLEAPEPLSRLLPAGIDQATAIALAE
HPAIAARLHQVDAAAFSVKSAEGTLLPNLSASASLTTTRTDTSGAAGAGGLAGSNDGTQNSASIGLNLTIPIYQGGEASA
RVRQSKESLGKARIDVDVTRDQVRQAVTSAWTQYQAAREALAANREQVNAARLALSGVIEERDVGQRTTLDVLNSQADVI
DARIELVNAQRNVVVASYAIVSAIGRLSPSRLGLNVATYDPQEHYNAVKDKWYGLRTPDGR
>Mature_460_residues
TFLRSRIVAALAATSVILSPLPASAETILGALTKAYQNNSSLNSSRATVRVTDENVAIAKSGMRPRVSGTGSLQLQNRDS
TEIRTGQFGISLQQPIFDGFQTHNNVRASEAQVRAANESLRNDELNLLLNAAIAYMDVIRDRQIAALRSENLQFLEEQVR
SARSRLDVGEGTRTDVAQAEASRQLALAQLAAARAQAAASAATYRQLVGDDPGTLEAPEPLSRLLPAGIDQATAIALAEH
PAIAARLHQVDAAAFSVKSAEGTLLPNLSASASLTTTRTDTSGAAGAGGLAGSNDGTQNSASIGLNLTIPIYQGGEASAR
VRQSKESLGKARIDVDVTRDQVRQAVTSAWTQYQAAREALAANREQVNAARLALSGVIEERDVGQRTTLDVLNSQADVID
ARIELVNAQRNVVVASYAIVSAIGRLSPSRLGLNVATYDPQEHYNAVKDKWYGLRTPDGR

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=436, Percent_Identity=27.2935779816514, Blast_Score=106, Evalue=3e-24,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 48942; Mature: 48811

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFLRSRIVAALAATSVILSPLPASAETILGALTKAYQNNSSLNSSRATVRVTDENVAIA
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEE
KSGMRPRVSGTGSLQLQNRDSTEIRTGQFGISLQQPIFDGFQTHNNVRASEAQVRAANES
CCCCCCCCCCCCEEEECCCCCCCEECCCCCCEECCHHHHHHHHCCCCCHHHHHHHHHHHH
LRNDELNLLLNAAIAYMDVIRDRQIAALRSENLQFLEEQVRSARSRLDVGEGTRTDVAQA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
EASRQLALAQLAAARAQAAASAATYRQLVGDDPGTLEAPEPLSRLLPAGIDQATAIALAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHEEHHHH
HPAIAARLHQVDAAAFSVKSAEGTLLPNLSASASLTTTRTDTSGAAGAGGLAGSNDGTQN
CCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
SASIGLNLTIPIYQGGEASARVRQSKESLGKARIDVDVTRDQVRQAVTSAWTQYQAAREA
CCEEEEEEEEEEEECCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
LAANREQVNAARLALSGVIEERDVGQRTTLDVLNSQADVIDARIELVNAQRNVVVASYAI
HHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCEEEHHHHH
VSAIGRLSPSRLGLNVATYDPQEHYNAVKDKWYGLRTPDGR
HHHHHCCCHHHHCCEEEECCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TFLRSRIVAALAATSVILSPLPASAETILGALTKAYQNNSSLNSSRATVRVTDENVAIA
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEE
KSGMRPRVSGTGSLQLQNRDSTEIRTGQFGISLQQPIFDGFQTHNNVRASEAQVRAANES
CCCCCCCCCCCCEEEECCCCCCCEECCCCCCEECCHHHHHHHHCCCCCHHHHHHHHHHHH
LRNDELNLLLNAAIAYMDVIRDRQIAALRSENLQFLEEQVRSARSRLDVGEGTRTDVAQA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
EASRQLALAQLAAARAQAAASAATYRQLVGDDPGTLEAPEPLSRLLPAGIDQATAIALAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHEEHHHH
HPAIAARLHQVDAAAFSVKSAEGTLLPNLSASASLTTTRTDTSGAAGAGGLAGSNDGTQN
CCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
SASIGLNLTIPIYQGGEASARVRQSKESLGKARIDVDVTRDQVRQAVTSAWTQYQAAREA
CCEEEEEEEEEEEECCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
LAANREQVNAARLALSGVIEERDVGQRTTLDVLNSQADVIDARIELVNAQRNVVVASYAI
HHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCEEEHHHHH
VSAIGRLSPSRLGLNVATYDPQEHYNAVKDKWYGLRTPDGR
HHHHHCCCHHHHCCEEEECCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]