Click here to switch to the map view.

The map label for this gene is 110633896

Identifier: 110633896

GI number: 110633896

Start: 1661813

End: 1662499

Strand: Direct

Name: 110633896

Synonym: Meso_1543

Alternate gene names: NA

Gene position: 1661813-1662499 (Clockwise)

Preceding gene: 110633895

Following gene: 110633899

Centisome position: 37.66

GC content: 62.45

Gene sequence:

>687_bases
ATGACGGGCGGGCGCGCCGTTGACAGTTTCAGCATCATCCGCAAGAAGGATCGAACGGGGCCGAATCCGTCTTTCGGGAG
CAAGCGGTTGGGTTTGAAGCGGGGTTATAGCGGGCTGGTGATCCTGAGCCTGATGCTCGGCGGATGCGCCGCTATCCCGG
GCTTTGGTCCCGCCCCGGTAGACGTCTATGATCTTACGGCGCCGGCGCTTCAGCTCGCTGCCGCCAGGCGCGCGCGCACT
CAGGTCCTGGTTCCGGAGCCGGAAGCATTGAAAATATTGGATGGTGAGGACATCGCCATCCGCACATCGACTGGCGCGCT
TCAGCTTCTAGGTGGCGCACGCTGGTCGGACCGGCTGCCCCGGCTGGTGCAGTCGGGACTGGTGGAAGCCTATCAGAAAT
CCGGCAGCTTTGCCGGCGTCGGAAGGCCCGGTGAAGGGCTCGCGATCGATTATCAGGTGATCGTCGATATCCGCACCTTC
GAGGTGCAGGTGGGGAACGGTTTGGCCCAAGTTCAGCTTTTCGTGCGTGTTCTCGACGACCGCACCGGCCAAGTCCGTGC
GTCTCGCGATTTCACGACCAGCGCACCGGTTGTCGGAAGCGGGGACGTGGCGTTCGTGGCAGCTCTCAATCAGGCATTCA
ATGCGGCAACGCGTGAAATCGTCGACTGGTCCCGTAGCGTGATGTAG

Upstream 100 bases:

>100_bases
GACGCCCGCCGTGCCATTTCACGCATCGAAAGCGCCGTCAGCGACCTGGAGCAGAATCCGCAACGGATCATTACCGGTGG
AGATGGCACCATCCGGCGCT

Downstream 100 bases:

>100_bases
GCGCTCCCGGCGTGCCGTAACGGCACTTCGGTCGCGGCGATTGAATTAAAAAAAGCCCCCGGTTGTCCGGGGGCTTCATC
GTTATGATCTGCGAGTTTGC

Product: ABC-type uncharacterized transport system auxiliary component-like

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTGGRAVDSFSIIRKKDRTGPNPSFGSKRLGLKRGYSGLVILSLMLGGCAAIPGFGPAPVDVYDLTAPALQLAAARRART
QVLVPEPEALKILDGEDIAIRTSTGALQLLGGARWSDRLPRLVQSGLVEAYQKSGSFAGVGRPGEGLAIDYQVIVDIRTF
EVQVGNGLAQVQLFVRVLDDRTGQVRASRDFTTSAPVVGSGDVAFVAALNQAFNAATREIVDWSRSVM

Sequences:

>Translated_228_residues
MTGGRAVDSFSIIRKKDRTGPNPSFGSKRLGLKRGYSGLVILSLMLGGCAAIPGFGPAPVDVYDLTAPALQLAAARRART
QVLVPEPEALKILDGEDIAIRTSTGALQLLGGARWSDRLPRLVQSGLVEAYQKSGSFAGVGRPGEGLAIDYQVIVDIRTF
EVQVGNGLAQVQLFVRVLDDRTGQVRASRDFTTSAPVVGSGDVAFVAALNQAFNAATREIVDWSRSVM
>Mature_227_residues
TGGRAVDSFSIIRKKDRTGPNPSFGSKRLGLKRGYSGLVILSLMLGGCAAIPGFGPAPVDVYDLTAPALQLAAARRARTQ
VLVPEPEALKILDGEDIAIRTSTGALQLLGGARWSDRLPRLVQSGLVEAYQKSGSFAGVGRPGEGLAIDYQVIVDIRTFE
VQVGNGLAQVQLFVRVLDDRTGQVRASRDFTTSAPVVGSGDVAFVAALNQAFNAATREIVDWSRSVM

Specific function: Unknown

COG id: COG3218

COG function: function code R; ABC-type uncharacterized transport system, auxiliary component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24171; Mature: 24040

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGGRAVDSFSIIRKKDRTGPNPSFGSKRLGLKRGYSGLVILSLMLGGCAAIPGFGPAPV
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC
DVYDLTAPALQLAAARRARTQVLVPEPEALKILDGEDIAIRTSTGALQLLGGARWSDRLP
EEEECCHHHHHHHHHHHHHCEEECCCCCEEEEECCCCEEEEECCCEEEECCCCCHHHHHH
RLVQSGLVEAYQKSGSFAGVGRPGEGLAIDYQVIVDIRTFEVQVGNGLAQVQLFVRVLDD
HHHHHHHHHHHHHCCCEECCCCCCCCEEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHC
RTGQVRASRDFTTSAPVVGSGDVAFVAALNQAFNAATREIVDWSRSVM
CCCCEEECCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TGGRAVDSFSIIRKKDRTGPNPSFGSKRLGLKRGYSGLVILSLMLGGCAAIPGFGPAPV
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC
DVYDLTAPALQLAAARRARTQVLVPEPEALKILDGEDIAIRTSTGALQLLGGARWSDRLP
EEEECCHHHHHHHHHHHHHCEEECCCCCEEEEECCCCEEEEECCCEEEECCCCCHHHHHH
RLVQSGLVEAYQKSGSFAGVGRPGEGLAIDYQVIVDIRTFEVQVGNGLAQVQLFVRVLDD
HHHHHHHHHHHHHCCCEECCCCCCCCEEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHC
RTGQVRASRDFTTSAPVVGSGDVAFVAALNQAFNAATREIVDWSRSVM
CCCCEEECCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA