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The map label for this gene is sdpR [H]

Identifier: 110633886

GI number: 110633886

Start: 1649465

End: 1649779

Strand: Reverse

Name: sdpR [H]

Synonym: Meso_1533

Alternate gene names: 110633886

Gene position: 1649779-1649465 (Counterclockwise)

Preceding gene: 110633889

Following gene: 110633885

Centisome position: 37.39

GC content: 62.54

Gene sequence:

>315_bases
ATGAACGAGTCGGATGTCTTTCGTGCCCTTGCGGATCCGACCAGGCGCGCGGTCCTGGAGCGGCTGCTCGATGGCGAGAA
GAACGCAAGCGAATTGCGGGAGGGACTCGGCATCTCACAGCCAGCGGTTTCGCAGCACGTGGCGGTGCTGCGGAGCGCAG
GCCTGATCGCGGAAAAGAAGAGTGGGCGGCATGTGCATTACAGCCTGGCGCCTGATGGGCTTGCGCCTGTGTTCGACTGG
CTCACCCGTTACCGCTCGTTCTGGCCGGCCCGTGTCGACAGGCTGAAGACGCTTCTGAAGGAGATGGATCAATGA

Upstream 100 bases:

>100_bases
CTGCGGAGACGCAAGCCATCGCCAACCACTGTTACACAGAGTTTCCTGCACTGGCGCAACGCTGCTTGCGTAAAACATAA
GTGCGTGCTTATATATTGCT

Downstream 100 bases:

>100_bases
CGCCCATGGACGAGGTTCGAACGAAGCCGGACGAGGTGGTCGTGGAATGCGAAATGGAGACCTCGCCCGAGAAGCTGTGG
CGGGCGCTCACGGAAGAGGC

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MNESDVFRALADPTRRAVLERLLDGEKNASELREGLGISQPAVSQHVAVLRSAGLIAEKKSGRHVHYSLAPDGLAPVFDW
LTRYRSFWPARVDRLKTLLKEMDQ

Sequences:

>Translated_104_residues
MNESDVFRALADPTRRAVLERLLDGEKNASELREGLGISQPAVSQHVAVLRSAGLIAEKKSGRHVHYSLAPDGLAPVFDW
LTRYRSFWPARVDRLKTLLKEMDQ
>Mature_104_residues
MNESDVFRALADPTRRAVLERLLDGEKNASELREGLGISQPAVSQHVAVLRSAGLIAEKKSGRHVHYSLAPDGLAPVFDW
LTRYRSFWPARVDRLKTLLKEMDQ

Specific function: Represses the transcription of the sdpIR operon and of several other operons that probably contribute to delaying commitment to sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11727; Mature: 11727

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNESDVFRALADPTRRAVLERLLDGEKNASELREGLGISQPAVSQHVAVLRSAGLIAEKK
CCHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
SGRHVHYSLAPDGLAPVFDWLTRYRSFWPARVDRLKTLLKEMDQ
CCCEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNESDVFRALADPTRRAVLERLLDGEKNASELREGLGISQPAVSQHVAVLRSAGLIAEKK
CCHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
SGRHVHYSLAPDGLAPVFDWLTRYRSFWPARVDRLKTLLKEMDQ
CCCEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]