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The map label for this gene is 110633827

Identifier: 110633827

GI number: 110633827

Start: 1572099

End: 1572485

Strand: Reverse

Name: 110633827

Synonym: Meso_1474

Alternate gene names: NA

Gene position: 1572485-1572099 (Counterclockwise)

Preceding gene: 110633831

Following gene: 110633826

Centisome position: 35.64

GC content: 59.17

Gene sequence:

>387_bases
ATGCTTTACGCCATTCTCTGCTATCACGACGAGGACGTGGTGATGTCCTGGAGCAAGGCCGAGGACGAAGCGGTCCTGGC
CAAGCGCAAGCTTGTGCAGAAGGATTTTGTCGAACGCGGCAAGATGGGACCGGCGATCAGGCTCGTGCCGACGACGGGCG
CAACGACGATCCGGGCCTCCGGCAACGAGCAGCTGGTTCTGGACGGACCCTTTGCAGAGACCAAGGAGCAGCTCCTCGGC
TTCTACCTCGTGGACTGCGAGAACCTGGACGAGGTGATCGATTTCGCCAAGCGCATGAAGGAAGGCGAGAGCTGCACCTT
TGAAATCCGCCCCGTCCAGATCTTTGAAGAAGGCGTGCTCCCTCAGAAGGTGAAAGTGGCATCATGA

Upstream 100 bases:

>100_bases
AGCGCAAGGCGAAACTCGCGGCGCCGCAGCGAAATTCCCTCGCGGCTCCTGTCGGAATGAGGCATGCTCGGCCGTCTTTT
AAGCGAACGAGGTGATGCCG

Downstream 100 bases:

>100_bases
ACGACATGGCCTGGATCGAGACTGCACTGACGGGCGCGCGCCCGCAGGCGATGGGTGCGCTTCTGCGCTATTTTCGCGAT
CTCGACCGGGCGGAAGAGGC

Product: DGPFAETKE domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MLYAILCYHDEDVVMSWSKAEDEAVLAKRKLVQKDFVERGKMGPAIRLVPTTGATTIRASGNEQLVLDGPFAETKEQLLG
FYLVDCENLDEVIDFAKRMKEGESCTFEIRPVQIFEEGVLPQKVKVAS

Sequences:

>Translated_128_residues
MLYAILCYHDEDVVMSWSKAEDEAVLAKRKLVQKDFVERGKMGPAIRLVPTTGATTIRASGNEQLVLDGPFAETKEQLLG
FYLVDCENLDEVIDFAKRMKEGESCTFEIRPVQIFEEGVLPQKVKVAS
>Mature_128_residues
MLYAILCYHDEDVVMSWSKAEDEAVLAKRKLVQKDFVERGKMGPAIRLVPTTGATTIRASGNEQLVLDGPFAETKEQLLG
FYLVDCENLDEVIDFAKRMKEGESCTFEIRPVQIFEEGVLPQKVKVAS

Specific function: Unknown

COG id: COG3795

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR005545 [H]

Pfam domain/function: PF03795 YCII [H]

EC number: NA

Molecular weight: Translated: 14385; Mature: 14385

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00037 MYB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYAILCYHDEDVVMSWSKAEDEAVLAKRKLVQKDFVERGKMGPAIRLVPTTGATTIRAS
CEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEC
GNEQLVLDGPFAETKEQLLGFYLVDCENLDEVIDFAKRMKEGESCTFEIRPVQIFEEGVL
CCCEEEEECCCHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEHEEECCCCC
PQKVKVAS
CCEEEECC
>Mature Secondary Structure
MLYAILCYHDEDVVMSWSKAEDEAVLAKRKLVQKDFVERGKMGPAIRLVPTTGATTIRAS
CEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEC
GNEQLVLDGPFAETKEQLLGFYLVDCENLDEVIDFAKRMKEGESCTFEIRPVQIFEEGVL
CCCEEEEECCCHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEHEEECCCCC
PQKVKVAS
CCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7751302; 11481430 [H]