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The map label for this gene is 110633788

Identifier: 110633788

GI number: 110633788

Start: 1530816

End: 1531694

Strand: Reverse

Name: 110633788

Synonym: Meso_1435

Alternate gene names: NA

Gene position: 1531694-1530816 (Counterclockwise)

Preceding gene: 110633789

Following gene: 110633787

Centisome position: 34.71

GC content: 65.98

Gene sequence:

>879_bases
ATGAAATGGAAGCGGTCCCACTGGATGCTGGCAGTCGGTGCCTCCTGCGTCATCCATGCGGGCGCGGCCGCGCTGATCGA
GCCTTCCAAGGAAGAGGTGCTGGTCGAGAGTGGCGGAAGCGGCGTGATCGTGCTCGGCAACAATGTCTTCGCGGACATGT
CCGCCATGGGCGAGGAATCGGAAATCGTGGAGCCGGAGACGGAGATCCCGGCGGCGATTGTGCCGCCGGAGCCGACTGTC
ACCGCGCCGGAGCCGGCCGAACCTTCGCCCGCTGATATCGCCGTACCGGCGGAGACAACAGAGCCCTTGGGGCCTGAGGA
GGAGGTGGCGATGCTGCCCATCCCGCGGCCGACACCCCGCCCGCATTACACTCCACCGAAGGTCGAGCCGCGCCAAGGCC
AGCCGCCCAGGCAGGCCCCCTCCCCGCGCCAACAAACCGAGGAAAGAAAGGAAAGTCCGAAACGGCAGGCCACGTCACGT
GGTTCGCGCGGTCAGAACACGCAAAATGCAAGGCGCGGTTCATCGGAAGGCAGCCGGACGGCAAGCGGAACGGAAAGCCA
GGGGCCGGGGCGTTCACGGCAAACCGGCAATGCCGCAACTTCCAACTACCCAGGAAAGATCGTCGCGAAATTGCGCCGTT
CGCTGCGCTATCCGCGCGAAGCCCGGCGGCAGCGCCTCGGTGGGGAGGTGCGCGTCGCATTTACGGTAACGCAGGACGGA
CGGGTAAGCGGCATTCGCATCGTGCGCAGCTCCGGCTCGCCTGTTCTGGACCAAGCAGCCCTCGAGACGGTCCAGCGAGC
GGCCCCTTTTCCCAAAATACCGGCCGAAGCGGGCCGACCATCGTGGCCCTTCACGGTCCCCCTCGAGTTCAAACGTTGA

Upstream 100 bases:

>100_bases
CGGCCGATCGCAATCTGCCGGCCGTGCGGCTGATCGAGATCGTGGGAGAGCTGCGCCAGGCGGGAGCCGCACGCATCAGC
ATCGTGACGGAGATCGCCGA

Downstream 100 bases:

>100_bases
AAGGATGTCTCCCATTTTTCACATTACCGCATTTCACCAATTGGCCGCCTCGCGTGGCGAGGGCTTGAGACAGGAGTTTC
TCGAACTCTTGCATCAACGG

Product: TonB family protein

Products: NA

Alternate protein names: NB-Like; NB Family C-Terminal Domain Protein; C-Terminal nB Protein; NB Dependent Receptor Protein; NB-Like Domain-Containing Protein

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKWKRSHWMLAVGASCVIHAGAAALIEPSKEEVLVESGGSGVIVLGNNVFADMSAMGEESEIVEPETEIPAAIVPPEPTV
TAPEPAEPSPADIAVPAETTEPLGPEEEVAMLPIPRPTPRPHYTPPKVEPRQGQPPRQAPSPRQQTEERKESPKRQATSR
GSRGQNTQNARRGSSEGSRTASGTESQGPGRSRQTGNAATSNYPGKIVAKLRRSLRYPREARRQRLGGEVRVAFTVTQDG
RVSGIRIVRSSGSPVLDQAALETVQRAAPFPKIPAEAGRPSWPFTVPLEFKR

Sequences:

>Translated_292_residues
MKWKRSHWMLAVGASCVIHAGAAALIEPSKEEVLVESGGSGVIVLGNNVFADMSAMGEESEIVEPETEIPAAIVPPEPTV
TAPEPAEPSPADIAVPAETTEPLGPEEEVAMLPIPRPTPRPHYTPPKVEPRQGQPPRQAPSPRQQTEERKESPKRQATSR
GSRGQNTQNARRGSSEGSRTASGTESQGPGRSRQTGNAATSNYPGKIVAKLRRSLRYPREARRQRLGGEVRVAFTVTQDG
RVSGIRIVRSSGSPVLDQAALETVQRAAPFPKIPAEAGRPSWPFTVPLEFKR
>Mature_292_residues
MKWKRSHWMLAVGASCVIHAGAAALIEPSKEEVLVESGGSGVIVLGNNVFADMSAMGEESEIVEPETEIPAAIVPPEPTV
TAPEPAEPSPADIAVPAETTEPLGPEEEVAMLPIPRPTPRPHYTPPKVEPRQGQPPRQAPSPRQQTEERKESPKRQATSR
GSRGQNTQNARRGSSEGSRTASGTESQGPGRSRQTGNAATSNYPGKIVAKLRRSLRYPREARRQRLGGEVRVAFTVTQDG
RVSGIRIVRSSGSPVLDQAALETVQRAAPFPKIPAEAGRPSWPFTVPLEFKR

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31430; Mature: 31430

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWKRSHWMLAVGASCVIHAGAAALIEPSKEEVLVESGGSGVIVLGNNVFADMSAMGEES
CCCCCCCEEEEECCHHHHHCCCCEEECCCCCEEEEECCCCEEEEECCCCEEHHHHCCCCC
EIVEPETEIPAAIVPPEPTVTAPEPAEPSPADIAVPAETTEPLGPEEEVAMLPIPRPTPR
CCCCCHHHCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEECCCCCCCC
PHYTPPKVEPRQGQPPRQAPSPRQQTEERKESPKRQATSRGSRGQNTQNARRGSSEGSRT
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCC
ASGTESQGPGRSRQTGNAATSNYPGKIVAKLRRSLRYPREARRQRLGGEVRVAFTVTQDG
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEECCCC
RVSGIRIVRSSGSPVLDQAALETVQRAAPFPKIPAEAGRPSWPFTVPLEFKR
CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MKWKRSHWMLAVGASCVIHAGAAALIEPSKEEVLVESGGSGVIVLGNNVFADMSAMGEES
CCCCCCCEEEEECCHHHHHCCCCEEECCCCCEEEEECCCCEEEEECCCCEEHHHHCCCCC
EIVEPETEIPAAIVPPEPTVTAPEPAEPSPADIAVPAETTEPLGPEEEVAMLPIPRPTPR
CCCCCHHHCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEECCCCCCCC
PHYTPPKVEPRQGQPPRQAPSPRQQTEERKESPKRQATSRGSRGQNTQNARRGSSEGSRT
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCC
ASGTESQGPGRSRQTGNAATSNYPGKIVAKLRRSLRYPREARRQRLGGEVRVAFTVTQDG
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEECCCC
RVSGIRIVRSSGSPVLDQAALETVQRAAPFPKIPAEAGRPSWPFTVPLEFKR
CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA