Click here to switch to the map view.

The map label for this gene is 110633731

Identifier: 110633731

GI number: 110633731

Start: 1472132

End: 1472842

Strand: Reverse

Name: 110633731

Synonym: Meso_1378

Alternate gene names: NA

Gene position: 1472842-1472132 (Counterclockwise)

Preceding gene: 110633732

Following gene: 110633730

Centisome position: 33.38

GC content: 61.6

Gene sequence:

>711_bases
ATGAACGACCTTTCCTGGCTGACCGCGCGGCCCATCGCACATCGCGGCTTCCATGACATGAACAACGCGCGGTGGGAAAA
TACGCTTGCCGCTTTCGGCGCTGCGGTCGAGCGCGGCTACGCAATCGAGTGCGATGTGCAGCTGAGCAGCGACGGCTCGC
CTGTCGTCTTTCACGATCACGACCTGGCGAGGCTCACCGGCGCGGAGGGCCAGGTCTGGCAACGCACGGCCGCGGAATTA
TGCGCCCTATCCGTGGGTGGCACCGCGGAGCGGGTTCCGGCGCTTTCAGAGATGCTGAACCATGTCAACGGCGCGGTGCC
GCTCGTGATCGAACTCAAGGGCGTTCCCGGCCACGACACGGGCCTCGTGGACAGTGTTTTGAAAAGCCTGCGCGGCTATC
GCGGCGAGGTGGCGCTGATGTCCTTCGATCACTGGATCATCCGGGAACTCGCGCGAAAGGCGGAAAATTTGCCGATAGGG
CTTACCGCCGAGGGTGAATCCGACAGCGCGCTCGAAGCGCATTTCTCCATGCTCGGCCACCATATCTCCTTTGTCTCCTA
TGCGGTGGCGCATGTTCCCAATCCCTTCATCTCCTTCGTGCGCCAGCGGCTTTCCATGCCGGTCATCACCTGGACGGTGC
GCAACCAGGTGGATCTGGAAAAGTCGTTCCGATATGCCGACCAGATCACTTTCGAAGGTTTTGCGCCTTGA

Upstream 100 bases:

>100_bases
ATCGCGGCCGGCATGCGCGGGCGGCAATAGGCATGGCCTCCCTCCCCCTCAACGCTCCAGTTGAAATCGATGCCATCATC
GAGGTGGCTCAGGACGTTTC

Downstream 100 bases:

>100_bases
GGATGGTGAAAGACACGGTGTCAGAGCCTATGTTCTGATGCGATGGCGACAAGACACGACAGGGATGGCGGGCAAACGAC
GGCGAATTTGACGATCGCAA

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester Phosphodiesterase; Glycerophosphoryl Diester Phosphodiesterase Family Protein; Glycerophosphoryl Diester Phosphodiesterase Family; Cytoplasmic Glycerophosphodiester Phosphodiesterase; Glycerophosphoryl Diester Phosphodiesterase Protein; Glycerophosphodiesterase; Phosphodiesterase

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MNDLSWLTARPIAHRGFHDMNNARWENTLAAFGAAVERGYAIECDVQLSSDGSPVVFHDHDLARLTGAEGQVWQRTAAEL
CALSVGGTAERVPALSEMLNHVNGAVPLVIELKGVPGHDTGLVDSVLKSLRGYRGEVALMSFDHWIIRELARKAENLPIG
LTAEGESDSALEAHFSMLGHHISFVSYAVAHVPNPFISFVRQRLSMPVITWTVRNQVDLEKSFRYADQITFEGFAP

Sequences:

>Translated_236_residues
MNDLSWLTARPIAHRGFHDMNNARWENTLAAFGAAVERGYAIECDVQLSSDGSPVVFHDHDLARLTGAEGQVWQRTAAEL
CALSVGGTAERVPALSEMLNHVNGAVPLVIELKGVPGHDTGLVDSVLKSLRGYRGEVALMSFDHWIIRELARKAENLPIG
LTAEGESDSALEAHFSMLGHHISFVSYAVAHVPNPFISFVRQRLSMPVITWTVRNQVDLEKSFRYADQITFEGFAP
>Mature_236_residues
MNDLSWLTARPIAHRGFHDMNNARWENTLAAFGAAVERGYAIECDVQLSSDGSPVVFHDHDLARLTGAEGQVWQRTAAEL
CALSVGGTAERVPALSEMLNHVNGAVPLVIELKGVPGHDTGLVDSVLKSLRGYRGEVALMSFDHWIIRELARKAENLPIG
LTAEGESDSALEAHFSMLGHHISFVSYAVAHVPNPFISFVRQRLSMPVITWTVRNQVDLEKSFRYADQITFEGFAP

Specific function: Unknown

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25975; Mature: 25975

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLSWLTARPIAHRGFHDMNNARWENTLAAFGAAVERGYAIECDVQLSSDGSPVVFHDH
CCCCCCHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCEEEEECC
DLARLTGAEGQVWQRTAAELCALSVGGTAERVPALSEMLNHVNGAVPLVIELKGVPGHDT
CHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
GLVDSVLKSLRGYRGEVALMSFDHWIIRELARKAENLPIGLTAEGESDSALEAHFSMLGH
HHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
HISFVSYAVAHVPNPFISFVRQRLSMPVITWTVRNQVDLEKSFRYADQITFEGFAP
HHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNDLSWLTARPIAHRGFHDMNNARWENTLAAFGAAVERGYAIECDVQLSSDGSPVVFHDH
CCCCCCHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCEEEEECC
DLARLTGAEGQVWQRTAAELCALSVGGTAERVPALSEMLNHVNGAVPLVIELKGVPGHDT
CHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
GLVDSVLKSLRGYRGEVALMSFDHWIIRELARKAENLPIGLTAEGESDSALEAHFSMLGH
HHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
HISFVSYAVAHVPNPFISFVRQRLSMPVITWTVRNQVDLEKSFRYADQITFEGFAP
HHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA