Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

Click here to switch to the map view.

The map label for this gene is 110633721

Identifier: 110633721

GI number: 110633721

Start: 1461405

End: 1461836

Strand: Direct

Name: 110633721

Synonym: Meso_1368

Alternate gene names: NA

Gene position: 1461405-1461836 (Clockwise)

Preceding gene: 110633720

Following gene: 110633722

Centisome position: 33.12

GC content: 63.43

Gene sequence:

>432_bases
ATGGCCCTTTATCTCATAAAATTGTGCGTTGGTTGCGAAAGCCCGGAAGATCTCGAAGAGTGGATCGCCGAGCGGCTTGA
GGAAAAGCTGCGCCGCGGAGAGCCTGAAGAGCAGTATCATGTCACCCGCATGGTGCCGAAGCAGACGGATGAGATCACGG
GCGGATCGCTCTATTGGGTGATCAAGGGCATGGTGCAGTGCCGTCAGCGGCTTCTCGACATCCGCCCTTTTGTGGACGGC
GAGGGCATTCAGCGCTGCCGGCTTGTGCTGGAGCCCGTCGTCGTGCGCACGGAATGGCAGCCGCGCCGCCCGTTCCAGGG
CTGGCGCTACCTGAAGCCTGAGGACGCGCCCGCCGATTTGACCGCCGGCTCCGGTACGGGCGACCTGCCGGACCACCTGC
GCCGCGAGCTGACGGAGCTCGGATTGTTGTAG

Upstream 100 bases:

>100_bases
AGTCTCGGCGGGCTTGCGGTCAATGTAGTAGAATGCTGACCGCCTGTGGAAAGGGCGGGGCCGCGTTGACCTTGCCTCTG
ATATTCCCGATGGTGCGGCC

Downstream 100 bases:

>100_bases
GCCTTGCCTCGAGGACCGCGAAAGCACATCTTTTCCCCATGAGCGACAGAAAGCCGCCGATGGAGACCGGGAGGAAAGCG
GAGGTCTCGAAGCCGCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MALYLIKLCVGCESPEDLEEWIAERLEEKLRRGEPEEQYHVTRMVPKQTDEITGGSLYWVIKGMVQCRQRLLDIRPFVDG
EGIQRCRLVLEPVVVRTEWQPRRPFQGWRYLKPEDAPADLTAGSGTGDLPDHLRRELTELGLL

Sequences:

>Translated_143_residues
MALYLIKLCVGCESPEDLEEWIAERLEEKLRRGEPEEQYHVTRMVPKQTDEITGGSLYWVIKGMVQCRQRLLDIRPFVDG
EGIQRCRLVLEPVVVRTEWQPRRPFQGWRYLKPEDAPADLTAGSGTGDLPDHLRRELTELGLL
>Mature_142_residues
ALYLIKLCVGCESPEDLEEWIAERLEEKLRRGEPEEQYHVTRMVPKQTDEITGGSLYWVIKGMVQCRQRLLDIRPFVDGE
GIQRCRLVLEPVVVRTEWQPRRPFQGWRYLKPEDAPADLTAGSGTGDLPDHLRRELTELGLL

Specific function: Unknown

COG id: COG5458

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16587; Mature: 16456

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALYLIKLCVGCESPEDLEEWIAERLEEKLRRGEPEEQYHVTRMVPKQTDEITGGSLYWV
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHH
IKGMVQCRQRLLDIRPFVDGEGIQRCRLVLEPVVVRTEWQPRRPFQGWRYLKPEDAPADL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
TAGSGTGDLPDHLRRELTELGLL
CCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALYLIKLCVGCESPEDLEEWIAERLEEKLRRGEPEEQYHVTRMVPKQTDEITGGSLYWV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHH
IKGMVQCRQRLLDIRPFVDGEGIQRCRLVLEPVVVRTEWQPRRPFQGWRYLKPEDAPADL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
TAGSGTGDLPDHLRRELTELGLL
CCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA