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The map label for this gene is smf [H]

Identifier: 110633709

GI number: 110633709

Start: 1449149

End: 1450285

Strand: Reverse

Name: smf [H]

Synonym: Meso_1356

Alternate gene names: 110633709

Gene position: 1450285-1449149 (Counterclockwise)

Preceding gene: 110633710

Following gene: 110633707

Centisome position: 32.87

GC content: 67.99

Gene sequence:

>1137_bases
ATGACCGCTGCGCCGCCGGCGGGCGGCCCGAAACTGGATGACCGGCAGCGCCAGGCCTGGCTGCGCCTCATCCGCACGGA
GAATGTCGGGCCTGCCACCTTCCGGATGCTGATCAACCGGTTCGGTTCGGCTGAGGAGGCATTGAAAGCACTGCCCGAGC
TTGCCCGCCGCGGCGGCGCGCGGCAGGTCAGGATCCGCTCGGAAGAGGAAATCGACGCGGAAATCGCGGCAGCGGCCCGC
ATGGGCGCGCAATTCATCGCGCTTGGCGAAGCCCACTATCCCCCGCTTCTGGCGGCTGTCGACAATCCTCCGCCGATCAT
CGCCGCGAAGGGGCATCTCAATCTGCTGCGCCAGCCGATGCTCGCCATCGTCGGTGCCCGCAACGCCTCGCTCGCCGCCG
TCAAGCTGGCGCAGCGCATGGCGATCGAGCTCGGCCGCGCCGGCTATGTCATCGCCTCGGGGCTCGCACGCGGGATCGAT
GCCGCCGCCCATCAGGGAAGCCTAGAGACGGGCACTGTGGCGGTTCTCGCCGGCGGCCTTGACCGCCCCTACCCGCCCGA
GAACGACGGGCTTTTCCGCGCGATCGGGGAACGCGGCGTGGTGCTGACGGAAATGCCGTTCGGCTGGGCGCCGCGAGCAC
GGGATTTTCCCCGTCGCAACCGCCTCGTCGCCGGCGTTTCCTATGGGCTCCTGGTGGTGGAGGCGGCACACCGCTCCGGA
TCTCTGATCAGCGCGCGGCTCGCCAACGAGATGGGGCGGCTCGTCTTTGCCATCCCCGGCTCGCCCCTCGATCCCCGTGC
GGCGGGCACCAACAAACTTCTGAAGGAAGGCGCCATCCTCGTTACCGAGAGCGGGGACATACTGACCGCCGTCGCGCCGC
TCATCGGCAGATTGCCGCCGTCGACGGCGGACCTGGAAGAAACGCCCGATCTTTCTGCTACCCCCGATCCCGGTGAGAAC
GAGCGGAGCCTTATTCTCCAAGCGTTGGGCGCCGCTCCCGTCGCCGTGGATGAGATTATCCATCACACCGGCTTGCCCGC
GGCGCAGGTTCTCCTCGTTCTGCTGGAACTGGACCTTGCCGGCAGGCTCGAACGCCATGCCGGAGGCAAGGTCTCGCTTC
TACCGCCGGAGTCTTGA

Upstream 100 bases:

>100_bases
CGCAGCTTTTCACCGTCCTCAGCCTTCTCGTCTTTCTGAAGCACCGGGCCAATATCCAGCGGCTGATACAGGGGAACGAA
TCGCGCATCGGAGCGAAGGG

Downstream 100 bases:

>100_bases
ACCGTCCGCGCTTAAAGAAGGCTCCTGGCTGGCCCGAAGCAGGTCACCGGTCTCTATCGTTGCCATCTCGATGAGATAGC
CAAGCAACTCGCAATCCTGC

Product: DNA protecting protein DprA

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MTAAPPAGGPKLDDRQRQAWLRLIRTENVGPATFRMLINRFGSAEEALKALPELARRGGARQVRIRSEEEIDAEIAAAAR
MGAQFIALGEAHYPPLLAAVDNPPPIIAAKGHLNLLRQPMLAIVGARNASLAAVKLAQRMAIELGRAGYVIASGLARGID
AAAHQGSLETGTVAVLAGGLDRPYPPENDGLFRAIGERGVVLTEMPFGWAPRARDFPRRNRLVAGVSYGLLVVEAAHRSG
SLISARLANEMGRLVFAIPGSPLDPRAAGTNKLLKEGAILVTESGDILTAVAPLIGRLPPSTADLEETPDLSATPDPGEN
ERSLILQALGAAPVAVDEIIHHTGLPAAQVLLVLLELDLAGRLERHAGGKVSLLPPES

Sequences:

>Translated_378_residues
MTAAPPAGGPKLDDRQRQAWLRLIRTENVGPATFRMLINRFGSAEEALKALPELARRGGARQVRIRSEEEIDAEIAAAAR
MGAQFIALGEAHYPPLLAAVDNPPPIIAAKGHLNLLRQPMLAIVGARNASLAAVKLAQRMAIELGRAGYVIASGLARGID
AAAHQGSLETGTVAVLAGGLDRPYPPENDGLFRAIGERGVVLTEMPFGWAPRARDFPRRNRLVAGVSYGLLVVEAAHRSG
SLISARLANEMGRLVFAIPGSPLDPRAAGTNKLLKEGAILVTESGDILTAVAPLIGRLPPSTADLEETPDLSATPDPGEN
ERSLILQALGAAPVAVDEIIHHTGLPAAQVLLVLLELDLAGRLERHAGGKVSLLPPES
>Mature_377_residues
TAAPPAGGPKLDDRQRQAWLRLIRTENVGPATFRMLINRFGSAEEALKALPELARRGGARQVRIRSEEEIDAEIAAAARM
GAQFIALGEAHYPPLLAAVDNPPPIIAAKGHLNLLRQPMLAIVGARNASLAAVKLAQRMAIELGRAGYVIASGLARGIDA
AAHQGSLETGTVAVLAGGLDRPYPPENDGLFRAIGERGVVLTEMPFGWAPRARDFPRRNRLVAGVSYGLLVVEAAHRSGS
LISARLANEMGRLVFAIPGSPLDPRAAGTNKLLKEGAILVTESGDILTAVAPLIGRLPPSTADLEETPDLSATPDPGENE
RSLILQALGAAPVAVDEIIHHTGLPAAQVLLVLLELDLAGRLERHAGGKVSLLPPES

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=310, Percent_Identity=36.4516129032258, Blast_Score=161, Evalue=6e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 39777; Mature: 39646

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAPPAGGPKLDDRQRQAWLRLIRTENVGPATFRMLINRFGSAEEALKALPELARRGGA
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
RQVRIRSEEEIDAEIAAAARMGAQFIALGEAHYPPLLAAVDNPPPIIAAKGHLNLLRQPM
EEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCCEEEECCHHHHHHHHH
LAIVGARNASLAAVKLAQRMAIELGRAGYVIASGLARGIDAAAHQGSLETGTVAVLAGGL
HHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
DRPYPPENDGLFRAIGERGVVLTEMPFGWAPRARDFPRRNRLVAGVSYGLLVVEAAHRSG
CCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEECHHCEEEEEECCCCC
SLISARLANEMGRLVFAIPGSPLDPRAAGTNKLLKEGAILVTESGDILTAVAPLIGRLPP
CHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHCCCC
STADLEETPDLSATPDPGENERSLILQALGAAPVAVDEIIHHTGLPAAQVLLVLLELDLA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
GRLERHAGGKVSLLPPES
HHHHHCCCCEEEECCCCC
>Mature Secondary Structure 
TAAPPAGGPKLDDRQRQAWLRLIRTENVGPATFRMLINRFGSAEEALKALPELARRGGA
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
RQVRIRSEEEIDAEIAAAARMGAQFIALGEAHYPPLLAAVDNPPPIIAAKGHLNLLRQPM
EEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCCEEEECCHHHHHHHHH
LAIVGARNASLAAVKLAQRMAIELGRAGYVIASGLARGIDAAAHQGSLETGTVAVLAGGL
HHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
DRPYPPENDGLFRAIGERGVVLTEMPFGWAPRARDFPRRNRLVAGVSYGLLVVEAAHRSG
CCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEECHHCEEEEEECCCCC
SLISARLANEMGRLVFAIPGSPLDPRAAGTNKLLKEGAILVTESGDILTAVAPLIGRLPP
CHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHCCCC
STADLEETPDLSATPDPGENERSLILQALGAAPVAVDEIIHHTGLPAAQVLLVLLELDLA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
GRLERHAGGKVSLLPPES
HHHHHCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]