| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633695
Identifier: 110633695
GI number: 110633695
Start: 1434794
End: 1435321
Strand: Direct
Name: 110633695
Synonym: Meso_1342
Alternate gene names: NA
Gene position: 1434794-1435321 (Clockwise)
Preceding gene: 110633694
Following gene: 110633696
Centisome position: 32.52
GC content: 59.85
Gene sequence:
>528_bases ATGTGGGGCTGTTTTAGGGGCACTCTTTCCAGAAGAGCGCAAGAGTCTGCGCCGGGAAAAGATATAGGCGATCCTCGCGA CTGCCGGCCGGCAGGCTTGGCCTGGAGAGGTCCGGCAACCGATCTTGGCCGGAACTGTCGAGGTTCGGCGGCCGTGGAGT TTGCGCTGGTCGCTCCGGTCCTCGTCCTCCTCTTTACGGGGATGATCGCATACGGCATCTATTTTGGGGCCATGCACTCG CTGCAGCAGTTGGCTGCGGATGCAGCCCGGGCCTCCCTTGCCGGGCTCAATGATGCCGAGCGGACAGACCTCGTCGCGCG TTTTCTCGACGAGAATGCAAGCGGCTATGCTTTCATCGATCCGCGCAAGCTCGACGTGGAGACCGTCAGCAATCCAACCG GCACGCAATTTGTCGTCCGCCTGCGCTACGACGCGAAAGACCTGCCAATCTGGACCTTGTTTAAAGATTTGCCTTTGCCC GGCAAGCAGATGTCGCGAACATCGACAATCAGGGTCGGAGGCATTTGA
Upstream 100 bases:
>100_bases TGAGCTCCATCTGCTGCGGCAGTGTTAATATTTCAGTTGAACGTGACTGTTAAGCTCCAGAAAGCGGGTTATCTGTCCGC CGACCTTGGGGAGGTCAGAA
Downstream 100 bases:
>100_bases TGATGGCCAGGATTGCCGGCAGGGCTGTCCAAGCCCTGAGGGATCGCTCCGGAAATGTGGCCGTCATGGCCGGGCTTCTT TTTCCCGTAATGCTTCTTGG
Product: TadE-like
Products: NA
Alternate protein names: TadE-Like; Signal Peptide Protein
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MWGCFRGTLSRRAQESAPGKDIGDPRDCRPAGLAWRGPATDLGRNCRGSAAVEFALVAPVLVLLFTGMIAYGIYFGAMHS LQQLAADAARASLAGLNDAERTDLVARFLDENASGYAFIDPRKLDVETVSNPTGTQFVVRLRYDAKDLPIWTLFKDLPLP GKQMSRTSTIRVGGI
Sequences:
>Translated_175_residues MWGCFRGTLSRRAQESAPGKDIGDPRDCRPAGLAWRGPATDLGRNCRGSAAVEFALVAPVLVLLFTGMIAYGIYFGAMHS LQQLAADAARASLAGLNDAERTDLVARFLDENASGYAFIDPRKLDVETVSNPTGTQFVVRLRYDAKDLPIWTLFKDLPLP GKQMSRTSTIRVGGI >Mature_175_residues MWGCFRGTLSRRAQESAPGKDIGDPRDCRPAGLAWRGPATDLGRNCRGSAAVEFALVAPVLVLLFTGMIAYGIYFGAMHS LQQLAADAARASLAGLNDAERTDLVARFLDENASGYAFIDPRKLDVETVSNPTGTQFVVRLRYDAKDLPIWTLFKDLPLP GKQMSRTSTIRVGGI
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18990; Mature: 18990
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWGCFRGTLSRRAQESAPGKDIGDPRDCRPAGLAWRGPATDLGRNCRGSAAVEFALVAPV CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHH LVLLFTGMIAYGIYFGAMHSLQQLAADAARASLAGLNDAERTDLVARFLDENASGYAFID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEC PRKLDVETVSNPTGTQFVVRLRYDAKDLPIWTLFKDLPLPGKQMSRTSTIRVGGI CCCCCCEECCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCHHHCCCCEEEECCC >Mature Secondary Structure MWGCFRGTLSRRAQESAPGKDIGDPRDCRPAGLAWRGPATDLGRNCRGSAAVEFALVAPV CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHH LVLLFTGMIAYGIYFGAMHSLQQLAADAARASLAGLNDAERTDLVARFLDENASGYAFID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEC PRKLDVETVSNPTGTQFVVRLRYDAKDLPIWTLFKDLPLPGKQMSRTSTIRVGGI CCCCCCEECCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCHHHCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA