| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633684
Identifier: 110633684
GI number: 110633684
Start: 1421934
End: 1422545
Strand: Reverse
Name: 110633684
Synonym: Meso_1331
Alternate gene names: NA
Gene position: 1422545-1421934 (Counterclockwise)
Preceding gene: 110633685
Following gene: 110633683
Centisome position: 32.24
GC content: 53.27
Gene sequence:
>612_bases ATGGTGAGCGTACGACCGCGACTAAAGCTTATAGAAGGCGGTGGAAAGAAGTCGTCTGAATGGCTCTCGCCTCCTTCAAC CGTATTGGGAAAGTCTCCCTTCGATAACGCGGCGATAATGGCTTACCGCGTGGCGCCTGGCGATTTACGAAAGCACATCG CTACTGGCCGCCATCAACCAATTCTGGACTTGTGGTGGCATGTGTACGGGGAAACACCGCCGGTTCCAGGGGCAGAGCGG TATTCCTCAATGTTCGCTGACACGGAGCAGGGACTGCATTCGGCCCATGCCTGTTTTCGTGGGATTATGCGGCCTGTCGC GGAAGACGATCGAGGCCTGGACTATGCAGCATTTGTAACCAAGCCAAAAGTGGGATTTCGCTACCGACCCTCGATGAGCT GTGTCATCGAACCCTACGATATACCGGAAGATTTGTTGTTCCTGATCTATGCACACCTTGATTTCCCTGAAGGCCGAGCT TATCAATCCAAGACAGGAAACAGACCAGTCACGAATGGCGTTGTAACGCATTGGCAACTAGTCGAATGCGATCCTGCTGA GCCTCTGTTGCCAATGGACTACGAGGCAAGATTCCGACGACGGTATTGGTGA
Upstream 100 bases:
>100_bases CCAGAACTTCACCATGGTGCGGAACGGGACTTGCGAGAAGTGCGACACATGCGGCGCGACGAGCGGGTGCAGTTGAGGGG CGAGGAGCATTATTGCTGCC
Downstream 100 bases:
>100_bases TGAGCATGTTCAAATGCAAACGGTAGCCGAACTCACGCGGTTCACGCCAAGAGCATTATACTATGCGGATGCGGATGCCT TGGAATACGTTCGCATCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MVSVRPRLKLIEGGGKKSSEWLSPPSTVLGKSPFDNAAIMAYRVAPGDLRKHIATGRHQPILDLWWHVYGETPPVPGAER YSSMFADTEQGLHSAHACFRGIMRPVAEDDRGLDYAAFVTKPKVGFRYRPSMSCVIEPYDIPEDLLFLIYAHLDFPEGRA YQSKTGNRPVTNGVVTHWQLVECDPAEPLLPMDYEARFRRRYW
Sequences:
>Translated_203_residues MVSVRPRLKLIEGGGKKSSEWLSPPSTVLGKSPFDNAAIMAYRVAPGDLRKHIATGRHQPILDLWWHVYGETPPVPGAER YSSMFADTEQGLHSAHACFRGIMRPVAEDDRGLDYAAFVTKPKVGFRYRPSMSCVIEPYDIPEDLLFLIYAHLDFPEGRA YQSKTGNRPVTNGVVTHWQLVECDPAEPLLPMDYEARFRRRYW >Mature_203_residues MVSVRPRLKLIEGGGKKSSEWLSPPSTVLGKSPFDNAAIMAYRVAPGDLRKHIATGRHQPILDLWWHVYGETPPVPGAER YSSMFADTEQGLHSAHACFRGIMRPVAEDDRGLDYAAFVTKPKVGFRYRPSMSCVIEPYDIPEDLLFLIYAHLDFPEGRA YQSKTGNRPVTNGVVTHWQLVECDPAEPLLPMDYEARFRRRYW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23077; Mature: 23077
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSVRPRLKLIEGGGKKSSEWLSPPSTVLGKSPFDNAAIMAYRVAPGDLRKHIATGRHQP CCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCHHHHHHHHCCCCCC ILDLWWHVYGETPPVPGAERYSSMFADTEQGLHSAHACFRGIMRPVAEDDRGLDYAAFVT HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE KPKVGFRYRPSMSCVIEPYDIPEDLLFLIYAHLDFPEGRAYQSKTGNRPVTNGVVTHWQL CCCCCEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEE VECDPAEPLLPMDYEARFRRRYW EECCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure MVSVRPRLKLIEGGGKKSSEWLSPPSTVLGKSPFDNAAIMAYRVAPGDLRKHIATGRHQP CCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCHHHHHHHHCCCCCC ILDLWWHVYGETPPVPGAERYSSMFADTEQGLHSAHACFRGIMRPVAEDDRGLDYAAFVT HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE KPKVGFRYRPSMSCVIEPYDIPEDLLFLIYAHLDFPEGRAYQSKTGNRPVTNGVVTHWQL CCCCCEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEE VECDPAEPLLPMDYEARFRRRYW EECCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA