| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110633680
Identifier: 110633680
GI number: 110633680
Start: 1419563
End: 1419955
Strand: Reverse
Name: 110633680
Synonym: Meso_1327
Alternate gene names: NA
Gene position: 1419955-1419563 (Counterclockwise)
Preceding gene: 110633683
Following gene: 110633679
Centisome position: 32.18
GC content: 61.83
Gene sequence:
>393_bases ATGGACCGATTCACCGGCGGTTGCCTGTGCGGCAACCTGCGCATTGTGGCGTTGGGATCCCCATACCGGGTCGGTCTTTG CCACTGCCTCGACTGCCGCAAGCATCACGGGGCCCTTTTTAGCGCATCCGCGATTTTCCCCCAGGAAGCGGTGACGATCG ACGGCGAAACACGCGACTATGCCGGACGGTTCTTCTGTCCGCGCTGCGGCTCTTCGGTTTTCGCCCGCAGCGGGGACGAA ATCGAAGTGAACCTCGGGTCACTGGATGCTCCCGACCAATTGATGCCCACCTACGAGAGCTGGATCGTCCGCCGCGAGTC CTGGTTGCCGTCTTTTCCGCTCAAGAGACGATACGACCGCGACCGTGACCCCACGAGTCGCTTTGAGGACTAG
Upstream 100 bases:
>100_bases CGCCTGAAAGTCAGCGTCATACTCTCCCGCATTCTTCCAAGGTGATCCTGTTAAAAGAGCAATCTCAAACCGTGGTCCGG CCCCATAGAGGAGATGCAGC
Downstream 100 bases:
>100_bases GCTGTGGGATCGATTCACACCGGGTCGCCGCCATGAAAGGCAAGCCTGCCAGCAGAAACGACCGCGCCTCGCGCCTCATT AACGCCCCTCCCCGCGCCAT
Product: glutathione-dependent formaldehyde-activating, GFA
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MDRFTGGCLCGNLRIVALGSPYRVGLCHCLDCRKHHGALFSASAIFPQEAVTIDGETRDYAGRFFCPRCGSSVFARSGDE IEVNLGSLDAPDQLMPTYESWIVRRESWLPSFPLKRRYDRDRDPTSRFED
Sequences:
>Translated_130_residues MDRFTGGCLCGNLRIVALGSPYRVGLCHCLDCRKHHGALFSASAIFPQEAVTIDGETRDYAGRFFCPRCGSSVFARSGDE IEVNLGSLDAPDQLMPTYESWIVRRESWLPSFPLKRRYDRDRDPTSRFED >Mature_130_residues MDRFTGGCLCGNLRIVALGSPYRVGLCHCLDCRKHHGALFSASAIFPQEAVTIDGETRDYAGRFFCPRCGSSVFARSGDE IEVNLGSLDAPDQLMPTYESWIVRRESWLPSFPLKRRYDRDRDPTSRFED
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14712; Mature: 14712
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRFTGGCLCGNLRIVALGSPYRVGLCHCLDCRKHHGALFSASAIFPQEAVTIDGETRDY CCCCCCCEEECCEEEEEECCCCCCHHHHHHHHHHHCCCEEECCCCCCCCEEEECCCCCCC AGRFFCPRCGSSVFARSGDEIEVNLGSLDAPDQLMPTYESWIVRRESWLPSFPLKRRYDR CCCEECCCCCCHHHHCCCCEEEEEECCCCCCHHHCCCHHHHHHHHCCCCCCCCCCHHCCC DRDPTSRFED CCCCCCCCCC >Mature Secondary Structure MDRFTGGCLCGNLRIVALGSPYRVGLCHCLDCRKHHGALFSASAIFPQEAVTIDGETRDY CCCCCCCEEECCEEEEEECCCCCCHHHHHHHHHHHCCCEEECCCCCCCCEEEECCCCCCC AGRFFCPRCGSSVFARSGDEIEVNLGSLDAPDQLMPTYESWIVRRESWLPSFPLKRRYDR CCCEECCCCCCHHHHCCCCEEEEEECCCCCCHHHCCCHHHHHHHHCCCCCCCCCCHHCCC DRDPTSRFED CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA