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The map label for this gene is 110633655

Identifier: 110633655

GI number: 110633655

Start: 1395206

End: 1395901

Strand: Reverse

Name: 110633655

Synonym: Meso_1302

Alternate gene names: NA

Gene position: 1395901-1395206 (Counterclockwise)

Preceding gene: 110633661

Following gene: 110633651

Centisome position: 31.64

GC content: 59.91

Gene sequence:

>696_bases
ATGCTGCTTATCGCTTGGCGGCGCTTGCAACGAAATAGCTTGAAACAGAACCGGTTGAACGAGGAAGGAAGCGCACTGGA
GAGATTGTCGGCACATTATCCACCGCCACGGCGCCTGTCCCAGATATTCGAAGATCTAGTGCATAATGCGCAGGGAACGG
CGATCACCGTGGATCAATTGCGAAATGCGCTGGGTGAGCGCAGCTTCGCGACGTTTCTTGTCTTCTTCGCGTTGCTCAAT
ATGCTTCCGCTGCCGCCGGGCAGCACGCTTGTGCTGGGTATTCCTCTCCTGCTCATCTCGATCCAGATGGTGCTGGGTCG
CAGCACGGTGTGGCTTCCACATTCGATCCTGACGAAGTCGGTGGGCGTGGAGCAATTTCGCCAGATGAGCGAAAAGCTCG
GCCCCAAGGTGAAACGGGTGGAGCGCCTGATCCGCCCGCGCTACTGGCCGTTCGCTCCGGGCCAGGCGGATCGCGCAGTC
GGCCTCTGCGCCCTCTTTCTGGGCGTCCTCATCACACTGCCGATCCCGTTCGGCAACTGGTTCCCGGCGCTTGCCTGCGC
GCTACTCGGCCTAGCACTCTCCGAATGTGACGGGCTTCTGCTCGGGATCGCCGTCGCAGTCGGGCTGTTTTCGCTTGTCA
TTGTGGGCGTCATTTTCGGCAGTGCGGGCGCCCTCGCAGCATTTTTCATACTGTAG

Upstream 100 bases:

>100_bases
GCTCGGCGGCCGGCGCAGAATGCCGTCGACCTTCAATATCAGCAGATGCATCCAGGCTTGATATCCTGGAGTTTCGGCGT
TCACATTAACCCGCTATATA

Downstream 100 bases:

>100_bases
CCTCATAGCCGCGTCGCTTTCTAATAAAGCTGGGTGCTCACGATTGCCTGCGCGAAAAGACCCCGCCGCCGTTCGCGCTA
GGAACGGGTGCGGCGGGGCG

Product: exopolysaccharide synthesis, ExoD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MLLIAWRRLQRNSLKQNRLNEEGSALERLSAHYPPPRRLSQIFEDLVHNAQGTAITVDQLRNALGERSFATFLVFFALLN
MLPLPPGSTLVLGIPLLLISIQMVLGRSTVWLPHSILTKSVGVEQFRQMSEKLGPKVKRVERLIRPRYWPFAPGQADRAV
GLCALFLGVLITLPIPFGNWFPALACALLGLALSECDGLLLGIAVAVGLFSLVIVGVIFGSAGALAAFFIL

Sequences:

>Translated_231_residues
MLLIAWRRLQRNSLKQNRLNEEGSALERLSAHYPPPRRLSQIFEDLVHNAQGTAITVDQLRNALGERSFATFLVFFALLN
MLPLPPGSTLVLGIPLLLISIQMVLGRSTVWLPHSILTKSVGVEQFRQMSEKLGPKVKRVERLIRPRYWPFAPGQADRAV
GLCALFLGVLITLPIPFGNWFPALACALLGLALSECDGLLLGIAVAVGLFSLVIVGVIFGSAGALAAFFIL
>Mature_231_residues
MLLIAWRRLQRNSLKQNRLNEEGSALERLSAHYPPPRRLSQIFEDLVHNAQGTAITVDQLRNALGERSFATFLVFFALLN
MLPLPPGSTLVLGIPLLLISIQMVLGRSTVWLPHSILTKSVGVEQFRQMSEKLGPKVKRVERLIRPRYWPFAPGQADRAV
GLCALFLGVLITLPIPFGNWFPALACALLGLALSECDGLLLGIAVAVGLFSLVIVGVIFGSAGALAAFFIL

Specific function: Unknown

COG id: COG3932

COG function: function code R; Uncharacterized ABC-type transport system, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti exoD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010331 [H]

Pfam domain/function: PF06055 ExoD [H]

EC number: NA

Molecular weight: Translated: 25277; Mature: 25277

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLIAWRRLQRNSLKQNRLNEEGSALERLSAHYPPPRRLSQIFEDLVHNAQGTAITVDQL
CEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEHHHH
RNALGERSFATFLVFFALLNMLPLPPGSTLVLGIPLLLISIQMVLGRSTVWLPHSILTKS
HHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VGVEQFRQMSEKLGPKVKRVERLIRPRYWPFAPGQADRAVGLCALFLGVLITLPIPFGNW
CCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCH
FPALACALLGLALSECDGLLLGIAVAVGLFSLVIVGVIFGSAGALAAFFIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
>Mature Secondary Structure
MLLIAWRRLQRNSLKQNRLNEEGSALERLSAHYPPPRRLSQIFEDLVHNAQGTAITVDQL
CEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEHHHH
RNALGERSFATFLVFFALLNMLPLPPGSTLVLGIPLLLISIQMVLGRSTVWLPHSILTKS
HHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VGVEQFRQMSEKLGPKVKRVERLIRPRYWPFAPGQADRAVGLCALFLGVLITLPIPFGNW
CCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCH
FPALACALLGLALSECDGLLLGIAVAVGLFSLVIVGVIFGSAGALAAFFIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]