| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is ypfG [C]
Identifier: 110633649
GI number: 110633649
Start: 1388118
End: 1389155
Strand: Reverse
Name: ypfG [C]
Synonym: Meso_1296
Alternate gene names: 110633649
Gene position: 1389155-1388118 (Counterclockwise)
Preceding gene: 110633651
Following gene: 110633641
Centisome position: 31.48
GC content: 61.66
Gene sequence:
>1038_bases ATGAAGCCACGCACTCTCCTTCAGATCGCAGGCTCTGTCCTGCTGACGCTCGGAGTCGAGGCCCGGGCCGCGGACCCGGC CTATCTCGACGACCGGTCAAGCCCGGAGGCGCTGGTGCAATCGCTTTATAACGCCATCAATCGAAAGGAATACGCGCGCG CTTACTCCTATTTCGGCACGCCGCCCGCCAAGGACCTCGACACATATGCGGCCGGATACGAGACGACCGAGCAGGTCGAT GTGGTTACGGGAGCTGCCAGCGAAGACGGAGCGGCCGGCAGCATCTATTATTCGCTGCCCGTCGCCATCCGCGCACGCGA GGCAAGCGGCGAAGAAAGGGTCTTTGCGGGCTGCTATGAGCTGAGATTCGTGCAGCCTTCGGTGCAGACGTCACCCTACA TCCCGCTTCAGATTGAGAGCGGGCAGTTGAAGCCCTCCGACAGTGCGCTCGCAGAGGCACTGCCGGCAAGCTGCGGTGAA GGGGCTGCGCAAACCGCCGACGCTACTTTGCAGCGCGCCGAACGGCTTTTTGACACGGTCTATGGCAGCATTTGCACGGG CGCGGGGTCGGAAAGCGGCACGGAGACGGAGAGCCACGTGATCCGCTTCAACTACGAATACGATTCACAGGGCACCGAGC CGCACGAGGCGCGGCTGTTCCGCTTCTTCTGCGATCGTGGCGCCTATAACGAAGTTCATGTCTACCTCCTCGCCAACGAG AACGGGGAGATCCTGCCCCTAAACTTCGCATCGCCGGAGCTCGACATCCGGTACGAGAATGGGGACCGGGAAGGACGCGT CGAGGAGGTGCGGATCATCGGCTTCAAGACGGAAGACCGGCTCGTCAATTCGGAATTCGACCCGGACACGCTCACACTTC TCACCCATGAAAAGTGGCGCGGCGTTGGGGATGCCTCCTCCAACGGGGAATGGATTTTCCGCTCGGGCTCCTTCTCGCTT GTCCGTTACGATGTGGATGCTTCCTATGACGGGGAGATCAACCCGGAGACGGTGCTCGACTATGCGACGGGGCCGTAA
Upstream 100 bases:
>100_bases ATCAAGCCAAGGCCGCCGCCGGCACGACGTTTTTCATACAATCCGCCAAAACGACGTCCTAACATCACCCAGTCTGCCAA GCGAACAGTGGAGCGATCCC
Downstream 100 bases:
>100_bases AAAGCCCCAACTTCTAGGGCCGCCGAGACAGCATCCAGTTGAGTGTATCGCGCCAATCGGTCATGCGGATCGGCGTACCA TGGGTGCCCGTCTCAAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MKPRTLLQIAGSVLLTLGVEARAADPAYLDDRSSPEALVQSLYNAINRKEYARAYSYFGTPPAKDLDTYAAGYETTEQVD VVTGAASEDGAAGSIYYSLPVAIRAREASGEERVFAGCYELRFVQPSVQTSPYIPLQIESGQLKPSDSALAEALPASCGE GAAQTADATLQRAERLFDTVYGSICTGAGSESGTETESHVIRFNYEYDSQGTEPHEARLFRFFCDRGAYNEVHVYLLANE NGEILPLNFASPELDIRYENGDREGRVEEVRIIGFKTEDRLVNSEFDPDTLTLLTHEKWRGVGDASSNGEWIFRSGSFSL VRYDVDASYDGEINPETVLDYATGP
Sequences:
>Translated_345_residues MKPRTLLQIAGSVLLTLGVEARAADPAYLDDRSSPEALVQSLYNAINRKEYARAYSYFGTPPAKDLDTYAAGYETTEQVD VVTGAASEDGAAGSIYYSLPVAIRAREASGEERVFAGCYELRFVQPSVQTSPYIPLQIESGQLKPSDSALAEALPASCGE GAAQTADATLQRAERLFDTVYGSICTGAGSESGTETESHVIRFNYEYDSQGTEPHEARLFRFFCDRGAYNEVHVYLLANE NGEILPLNFASPELDIRYENGDREGRVEEVRIIGFKTEDRLVNSEFDPDTLTLLTHEKWRGVGDASSNGEWIFRSGSFSL VRYDVDASYDGEINPETVLDYATGP >Mature_345_residues MKPRTLLQIAGSVLLTLGVEARAADPAYLDDRSSPEALVQSLYNAINRKEYARAYSYFGTPPAKDLDTYAAGYETTEQVD VVTGAASEDGAAGSIYYSLPVAIRAREASGEERVFAGCYELRFVQPSVQTSPYIPLQIESGQLKPSDSALAEALPASCGE GAAQTADATLQRAERLFDTVYGSICTGAGSESGTETESHVIRFNYEYDSQGTEPHEARLFRFFCDRGAYNEVHVYLLANE NGEILPLNFASPELDIRYENGDREGRVEEVRIIGFKTEDRLVNSEFDPDTLTLLTHEKWRGVGDASSNGEWIFRSGSFSL VRYDVDASYDGEINPETVLDYATGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37867; Mature: 37867
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPRTLLQIAGSVLLTLGVEARAADPAYLDDRSSPEALVQSLYNAINRKEYARAYSYFGT CCCHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC PPAKDLDTYAAGYETTEQVDVVTGAASEDGAAGSIYYSLPVAIRAREASGEERVFAGCYE CCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEECCEEEEEECCCCCCCEEEEEEE LRFVQPSVQTSPYIPLQIESGQLKPSDSALAEALPASCGEGAAQTADATLQRAERLFDTV EEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH YGSICTGAGSESGTETESHVIRFNYEYDSQGTEPHEARLFRFFCDRGAYNEVHVYLLANE HHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECC NGEILPLNFASPELDIRYENGDREGRVEEVRIIGFKTEDRLVNSEFDPDTLTLLTHEKWR CCCEEEEECCCCCEEEEECCCCCCCCEEEEEEEEEECCCCEECCCCCCCEEEEEEHHHHC GVGDASSNGEWIFRSGSFSLVRYDVDASYDGEINPETVLDYATGP CCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCHHHEEEECCCC >Mature Secondary Structure MKPRTLLQIAGSVLLTLGVEARAADPAYLDDRSSPEALVQSLYNAINRKEYARAYSYFGT CCCHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC PPAKDLDTYAAGYETTEQVDVVTGAASEDGAAGSIYYSLPVAIRAREASGEERVFAGCYE CCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEECCEEEEEECCCCCCCEEEEEEE LRFVQPSVQTSPYIPLQIESGQLKPSDSALAEALPASCGEGAAQTADATLQRAERLFDTV EEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH YGSICTGAGSESGTETESHVIRFNYEYDSQGTEPHEARLFRFFCDRGAYNEVHVYLLANE HHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECC NGEILPLNFASPELDIRYENGDREGRVEEVRIIGFKTEDRLVNSEFDPDTLTLLTHEKWR CCCEEEEECCCCCEEEEECCCCCCCCEEEEEEEEEECCCCEECCCCCCCEEEEEEHHHHC GVGDASSNGEWIFRSGSFSLVRYDVDASYDGEINPETVLDYATGP CCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCHHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA