| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is yagQ [C]
Identifier: 110633645
GI number: 110633645
Start: 1384461
End: 1384799
Strand: Direct
Name: yagQ [C]
Synonym: Meso_1292
Alternate gene names: 110633645
Gene position: 1384461-1384799 (Clockwise)
Preceding gene: 110633644
Following gene: 110633646
Centisome position: 31.38
GC content: 64.01
Gene sequence:
>339_bases ATGCCGCAAAGCGTAGAAACCCATGAGCCGCGCGATCCCCTTTTGATCGCCGAGGAATGGATGAAGGACGGCAAGGATGT GGCTGTCGCCACGGTCGTGGAGACATGGGGTTCGGCCCCGCGTCCGGTCGGCAGCCATCTGGTCATCGATTCCGAAGGCC TGTTCGAAGGCTCCGTTTCCGGTGGTTGCGTTGAGGGAGCGGTGATTGCCGAAGCGGCTGAGGTGATCGCCGACGGCAAA CCGCGCATGCTGGAATTCGGCGTGGCGGACGAGACCGCTTGGCGCGTCGGGCTTTCCTGCGGCGGCCGCATCAAGGTCTA TGTGGAGCGGCTGGGCTGA
Upstream 100 bases:
>100_bases GCCGCGCAAGGCCGTCAGCTCTTCTTGAAGGGCTTGGCAAGCGCCCGCCCGCGTGACCATATTGTGAATCATCCCACGCC TCATAATCGAGGAGGCAGAC
Downstream 100 bases:
>100_bases TATGGACCCCTATTCACTCAAGAAGCTCAATCAGTGTCGTCGTGAGCGGCGAGCCGCAATCCTTCTCACCGATCTGGGCG ACGGTCGCGACCGGGTGGTG
Product: sulfurylase small subunit, molybdopterin cytosine dinucleotide biosynthesis
Products: NA
Alternate protein names: Xanthine Dehydrogenase Accessory Factor; Xanthine Dehydrogenase Accessory Factor XdhC/CoxI; XdhC/CoxF Family Protein; Xanthine And Co Dehydrogenase Maturation Factor; CoxI Protein; Carbon Monoxide Dehydrogenase Accessory Protein; Xanthine Dehydrogenase Accessory Factor Subfamily; Xanthine Dehydrogenase; Xanthine Dehydrogenase Accessory Factor Subfamily Putative; XdhC Family Protein; Xanthine And CO Dehydrogenase Maturation Factor; Xanthine/CO Dehydrogenase Maturation Factor
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MPQSVETHEPRDPLLIAEEWMKDGKDVAVATVVETWGSAPRPVGSHLVIDSEGLFEGSVSGGCVEGAVIAEAAEVIADGK PRMLEFGVADETAWRVGLSCGGRIKVYVERLG
Sequences:
>Translated_112_residues MPQSVETHEPRDPLLIAEEWMKDGKDVAVATVVETWGSAPRPVGSHLVIDSEGLFEGSVSGGCVEGAVIAEAAEVIADGK PRMLEFGVADETAWRVGLSCGGRIKVYVERLG >Mature_111_residues PQSVETHEPRDPLLIAEEWMKDGKDVAVATVVETWGSAPRPVGSHLVIDSEGLFEGSVSGGCVEGAVIAEAAEVIADGKP RMLEFGVADETAWRVGLSCGGRIKVYVERLG
Specific function: Unknown
COG id: COG1975
COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11878; Mature: 11746
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQSVETHEPRDPLLIAEEWMKDGKDVAVATVVETWGSAPRPVGSHLVIDSEGLFEGSVS CCCCCCCCCCCCCEEEEHHHHCCCCCEEEHHEEHHHCCCCCCCCCEEEECCCCCEECCCC GGCVEGAVIAEAAEVIADGKPRMLEFGVADETAWRVGLSCGGRIKVYVERLG CCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCEEEEEEEECC >Mature Secondary Structure PQSVETHEPRDPLLIAEEWMKDGKDVAVATVVETWGSAPRPVGSHLVIDSEGLFEGSVS CCCCCCCCCCCCEEEEHHHHCCCCCEEEHHEEHHHCCCCCCCCCEEEECCCCCEECCCC GGCVEGAVIAEAAEVIADGKPRMLEFGVADETAWRVGLSCGGRIKVYVERLG CCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA