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The map label for this gene is ycbC [H]

Identifier: 110633611

GI number: 110633611

Start: 1352439

End: 1353245

Strand: Reverse

Name: ycbC [H]

Synonym: Meso_1258

Alternate gene names: 110633611

Gene position: 1353245-1352439 (Counterclockwise)

Preceding gene: 110633613

Following gene: 110633610

Centisome position: 30.67

GC content: 61.71

Gene sequence:

>807_bases
GTGCCGGCCGTGTTCTTCTTTCTTTCCAAGCTGTTTTCGATTTTCGCGGTTCCTTCGAACCTGGTCGGATTCGTCGCGCT
TCTTGGTCTCGTCCTTCTTCTTTTCCGGCGGAAAGTTGCCGGCACACTCTTCGTGGGCACCGCGGCCATTCTGCTCGCCG
TCATCGGCTGGTCGCCGCTCGGCAGCGCGGCGCTGCTGGCGCTGGAGAACCGGTTTCCGAGGCCAGCAATCAGCGGCCCG
ATCGCCGGAATTGTCGTTCTTGGCGGAGAAATAGACACCGATGTTTCAGCCGAACGTAAGACCATCGCCCTGACCGATGC
GGCGGAGCGGCTTACCAAGACGGCTGAGTTCAACCGCCTTTACCCGAATGCCAGAATTCTTCTCTCGGGCGGCATCAACG
ACCTGCTGATCACCCATGACAGGACCGAAGCGGCGCTTGCGCGTGAACTTCTCGTGAAGATCGGCGTGCCGGCCGACAGG
ATCGAGCTTGAGGAGCGCTCCCGAAACACGTGCGAGAATGCAATCGAGAGCAAGGCGGTAGCGGCTCCGAAACCCGGCGA
GACATGGCTGCTCGTCACGTCCGCGTTTCATATGCCGAGGGCGGTTGGCTGCTTTCGCGCCGCCGGCTTCCCCGTCCTCC
CCTATCCCGTCGACTACCTGGCCCGACGCTCCGCCCTGAGCAGCCTCGCCCCTTCTGTCGCCGCAGGACTTTATCTGACG
GACATCGCCGCTCATGAGTGGCTGGGGCTCGCAGCATATTATTTCGCCAAGGGAACCGAGCTGTTCCCAGCACCGGAAGG
AAGCTAG

Upstream 100 bases:

>100_bases
GAAGCAGCGGCGCACTGTTGAGATGATGGAACCTCCTCCGGACGGTCAACTCGTTCCCCTCGAAAACACCTTTTAAAATC
CGCGGTGGGGATAAGCAGGG

Downstream 100 bases:

>100_bases
CCGGTTCTCGGGCAAAAGCGTCTGGCAGGAAGAAAGCCGCGCTTGTTTTTGGCGCGGTACTGCAGAAACCAACCAGAAAT
CGCTCCCATTGCTATAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MPAVFFFLSKLFSIFAVPSNLVGFVALLGLVLLLFRRKVAGTLFVGTAAILLAVIGWSPLGSAALLALENRFPRPAISGP
IAGIVVLGGEIDTDVSAERKTIALTDAAERLTKTAEFNRLYPNARILLSGGINDLLITHDRTEAALARELLVKIGVPADR
IELEERSRNTCENAIESKAVAAPKPGETWLLVTSAFHMPRAVGCFRAAGFPVLPYPVDYLARRSALSSLAPSVAAGLYLT
DIAAHEWLGLAAYYFAKGTELFPAPEGS

Sequences:

>Translated_268_residues
MPAVFFFLSKLFSIFAVPSNLVGFVALLGLVLLLFRRKVAGTLFVGTAAILLAVIGWSPLGSAALLALENRFPRPAISGP
IAGIVVLGGEIDTDVSAERKTIALTDAAERLTKTAEFNRLYPNARILLSGGINDLLITHDRTEAALARELLVKIGVPADR
IELEERSRNTCENAIESKAVAAPKPGETWLLVTSAFHMPRAVGCFRAAGFPVLPYPVDYLARRSALSSLAPSVAAGLYLT
DIAAHEWLGLAAYYFAKGTELFPAPEGS
>Mature_267_residues
PAVFFFLSKLFSIFAVPSNLVGFVALLGLVLLLFRRKVAGTLFVGTAAILLAVIGWSPLGSAALLALENRFPRPAISGPI
AGIVVLGGEIDTDVSAERKTIALTDAAERLTKTAEFNRLYPNARILLSGGINDLLITHDRTEAALARELLVKIGVPADRI
ELEERSRNTCENAIESKAVAAPKPGETWLLVTSAFHMPRAVGCFRAAGFPVLPYPVDYLARRSALSSLAPSVAAGLYLTD
IAAHEWLGLAAYYFAKGTELFPAPEGS

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=241, Percent_Identity=26.9709543568465, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 28619; Mature: 28487

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAVFFFLSKLFSIFAVPSNLVGFVALLGLVLLLFRRKVAGTLFVGTAAILLAVIGWSPL
CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GSAALLALENRFPRPAISGPIAGIVVLGGEIDTDVSAERKTIALTDAAERLTKTAEFNRL
CHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHC
YPNARILLSGGINDLLITHDRTEAALARELLVKIGVPADRIELEERSRNTCENAIESKAV
CCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
AAPKPGETWLLVTSAFHMPRAVGCFRAAGFPVLPYPVDYLARRSALSSLAPSVAAGLYLT
CCCCCCCEEEEEECHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DIAAHEWLGLAAYYFAKGTELFPAPEGS
HHHHHHHHHHHHHHHHCCCEECCCCCCC
>Mature Secondary Structure 
PAVFFFLSKLFSIFAVPSNLVGFVALLGLVLLLFRRKVAGTLFVGTAAILLAVIGWSPL
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GSAALLALENRFPRPAISGPIAGIVVLGGEIDTDVSAERKTIALTDAAERLTKTAEFNRL
CHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHC
YPNARILLSGGINDLLITHDRTEAALARELLVKIGVPADRIELEERSRNTCENAIESKAV
CCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
AAPKPGETWLLVTSAFHMPRAVGCFRAAGFPVLPYPVDYLARRSALSSLAPSVAAGLYLT
CCCCCCCEEEEEECHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DIAAHEWLGLAAYYFAKGTELFPAPEGS
HHHHHHHHHHHHHHHHCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]