Click here to switch to the map view.

The map label for this gene is 110633533

Identifier: 110633533

GI number: 110633533

Start: 1289669

End: 1290799

Strand: Reverse

Name: 110633533

Synonym: Meso_1180

Alternate gene names: NA

Gene position: 1290799-1289669 (Counterclockwise)

Preceding gene: 110633534

Following gene: 110633521

Centisome position: 29.25

GC content: 60.57

Gene sequence:

>1131_bases
ATGGGCAAAGTGAAAATCCGCTACTACACCGTGAAGAAGGGGCGCGGGTATTGGCAACCCACCCAGGCCATGCGCTCTCT
CGGGTTCAACCCGGTTTCATGCGGACCAGATGGTCCCGCCGCCTGGGCGAAAGCAGAGAAGCTGAATACGGCATGGGACG
CGCGCCTATCGCAGGCAGCCCCAGCCATTCCCGATATCCAGAAATGGCCGGCGGGCTCGATCGGAGAAGCCTTCGACATT
TACCGTCAAACGCCGGAATGGGCCAAGAAGGCAGTCAGAACGCGGGAAGATTGGGAGCGCGGCTGGAAGTATATCGGCCC
CGTGTTCGGCCGTTTCTCACCCCTCCTGGTCACCATGCCGGTGATATCGGAATGGAGGCAGGGGATCGAGGATCAGGTAA
GCCTCAGGGAGGCGCACCGGGCCATGAAGATCTGGCGCGCGCTCTGGAAGGTAATGGCGGCGATGCGCTATTGCACTCCA
GATGCCGACCCCTCATTCGGGGTTAGAAACACAGAGCCCAAAGGGCGCCGGGAGACATGGAAGGAAGGCGAGGCCGTCCG
ATTGGTCAAGCGCGCGATTAGAATGAAGTATCTCGGGCTCGCGGCCGCCCTTGCCTGCATGTGGGACGGCGCAGTCGCCC
CGGTCGATGCACGCAAACTGACGCTGGCCCAACGCCAGCAGGATGACCTGGGAACATGGTTCGAGCTTGGTCGAGCAAAG
ACAGGCCGCGATGCCGTTCTTACGCTTTCGCGCCGCACGGAAAGACTTCTGAACTGGTATTTGGAGAAGCAGTTCGGTGA
GGCCGAGCCGATCGGAAGCATGTGCATCTTTCGGACCCGCCGCGGGGCTGCCTATACCAAGAACAGCTTCGCAGAGGATT
TTCGGGATATCAGGAATGCCGAGTTCCCCGGTGATACGCGGAAAATGCTGGACTTCCGGCGCTCGGGATCGGTCGAGGCC
GTGGCCGGAGGCGTAGAGGGGACAGCACTTTCGGCCAAGCTTGCTAACTCGCTCAGCCAATCGAAAAAGCTCGAACAGAC
ATATGTGCCTGTGCACGTCGAAATGGTGCGCGCGGCCGATGCGGCGCGGAAGCTTGGCCGAGAGAAACTGAGGGGAAAAA
AGACAGGGTGA

Upstream 100 bases:

>100_bases
AAGCTGTGGACAGATGGATTGATCAAAAGGCTGGCTTGCTTCCCGAGGACGATCCGGTTTCCGCTCAGGCTGCGATGTTG
CGGTCAGTTCGGGAACGGGC

Downstream 100 bases:

>100_bases
AATCGTTCCAAGTTTCACGGTTTGTCCAAGGTCAAATCGTTGCTCTCAGAAATTTGGAACCTGTTGTTTTTGCTGGCTAT
CCTCTCGGCCTGTCACGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MGKVKIRYYTVKKGRGYWQPTQAMRSLGFNPVSCGPDGPAAWAKAEKLNTAWDARLSQAAPAIPDIQKWPAGSIGEAFDI
YRQTPEWAKKAVRTREDWERGWKYIGPVFGRFSPLLVTMPVISEWRQGIEDQVSLREAHRAMKIWRALWKVMAAMRYCTP
DADPSFGVRNTEPKGRRETWKEGEAVRLVKRAIRMKYLGLAAALACMWDGAVAPVDARKLTLAQRQQDDLGTWFELGRAK
TGRDAVLTLSRRTERLLNWYLEKQFGEAEPIGSMCIFRTRRGAAYTKNSFAEDFRDIRNAEFPGDTRKMLDFRRSGSVEA
VAGGVEGTALSAKLANSLSQSKKLEQTYVPVHVEMVRAADAARKLGREKLRGKKTG

Sequences:

>Translated_376_residues
MGKVKIRYYTVKKGRGYWQPTQAMRSLGFNPVSCGPDGPAAWAKAEKLNTAWDARLSQAAPAIPDIQKWPAGSIGEAFDI
YRQTPEWAKKAVRTREDWERGWKYIGPVFGRFSPLLVTMPVISEWRQGIEDQVSLREAHRAMKIWRALWKVMAAMRYCTP
DADPSFGVRNTEPKGRRETWKEGEAVRLVKRAIRMKYLGLAAALACMWDGAVAPVDARKLTLAQRQQDDLGTWFELGRAK
TGRDAVLTLSRRTERLLNWYLEKQFGEAEPIGSMCIFRTRRGAAYTKNSFAEDFRDIRNAEFPGDTRKMLDFRRSGSVEA
VAGGVEGTALSAKLANSLSQSKKLEQTYVPVHVEMVRAADAARKLGREKLRGKKTG
>Mature_375_residues
GKVKIRYYTVKKGRGYWQPTQAMRSLGFNPVSCGPDGPAAWAKAEKLNTAWDARLSQAAPAIPDIQKWPAGSIGEAFDIY
RQTPEWAKKAVRTREDWERGWKYIGPVFGRFSPLLVTMPVISEWRQGIEDQVSLREAHRAMKIWRALWKVMAAMRYCTPD
ADPSFGVRNTEPKGRRETWKEGEAVRLVKRAIRMKYLGLAAALACMWDGAVAPVDARKLTLAQRQQDDLGTWFELGRAKT
GRDAVLTLSRRTERLLNWYLEKQFGEAEPIGSMCIFRTRRGAAYTKNSFAEDFRDIRNAEFPGDTRKMLDFRRSGSVEAV
AGGVEGTALSAKLANSLSQSKKLEQTYVPVHVEMVRAADAARKLGREKLRGKKTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42464; Mature: 42333

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GKVKIRYYTVKKGRGYWQPTQAMRSLGFNPVSCGPDGPAAWAKAEKLNTAWDARLSQAA
CCEEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC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HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA