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The map label for this gene is 110633481

Identifier: 110633481

GI number: 110633481

Start: 1236192

End: 1236650

Strand: Reverse

Name: 110633481

Synonym: Meso_1128

Alternate gene names: NA

Gene position: 1236650-1236192 (Counterclockwise)

Preceding gene: 110633482

Following gene: 110633480

Centisome position: 28.03

GC content: 59.69

Gene sequence:

>459_bases
ATGGTTGCAAAAACGATCGATCTCCGCGAGGACCGTTTCAGCGCGCGGAGCTTCGACGGCGTGCTGACGCGGCGCGTGAT
CGCATTCTTCATTGATTACCTGCTGATCGGGCTGCTTCTTATTCCTGTCGGGCTTTTCGTATTTATTCTCGGCATCTTCA
CGGTCGGCCTTGGCTGGCTTCTCTTCGGCATTCTCGGCCCGCTGACTGCGCTTTGCTATGTCGCCTGGACCCTGGGAGGG
CCGCGGCAGGCAACGATCGGGATGCGGGTAATGGGCATTCGGCTGGAGCGGCTCGACGGCGCGCCTGTGGACTGGATGCT
TGCCGTCGCCCACACGGTTCTCTTCTGGGCCGGCAACGCGATTCTCACGCCGCTCATCCTTTTGGCTGCATGGTTCCTGA
GCTACAAGCGGACACTCCACGATCTTCTGCTTGGAACCGTAGTCGTGCGCACGAATTAA

Upstream 100 bases:

>100_bases
CGGAGGCAGCTCAACTTTTACGCGCTTAGCGGCACTCACTTGAAAACGCCCGTAGGGTCCCCATCTGCTGAGCTTTGACC
CGTTTTTGAAAGGCGTTGTT

Downstream 100 bases:

>100_bases
TGGGGAGTCGTGGCGGGGATCTGCCGCCACAACAATCCCATTGACCTTTTTCATCTTCGGTTCATGGTTATATTGATCTT
GTAGTGAGAGGGGCCGCGTT

Product: RDD domain-containing protein

Products: NA

Alternate protein names: Transmembrane Protein; RDD Domain Containing Protein; RDD Family; RDD Family Protein

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MVAKTIDLREDRFSARSFDGVLTRRVIAFFIDYLLIGLLLIPVGLFVFILGIFTVGLGWLLFGILGPLTALCYVAWTLGG
PRQATIGMRVMGIRLERLDGAPVDWMLAVAHTVLFWAGNAILTPLILLAAWFLSYKRTLHDLLLGTVVVRTN

Sequences:

>Translated_152_residues
MVAKTIDLREDRFSARSFDGVLTRRVIAFFIDYLLIGLLLIPVGLFVFILGIFTVGLGWLLFGILGPLTALCYVAWTLGG
PRQATIGMRVMGIRLERLDGAPVDWMLAVAHTVLFWAGNAILTPLILLAAWFLSYKRTLHDLLLGTVVVRTN
>Mature_152_residues
MVAKTIDLREDRFSARSFDGVLTRRVIAFFIDYLLIGLLLIPVGLFVFILGIFTVGLGWLLFGILGPLTALCYVAWTLGG
PRQATIGMRVMGIRLERLDGAPVDWMLAVAHTVLFWAGNAILTPLILLAAWFLSYKRTLHDLLLGTVVVRTN

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16874; Mature: 16874

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAKTIDLREDRFSARSFDGVLTRRVIAFFIDYLLIGLLLIPVGLFVFILGIFTVGLGWL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFGILGPLTALCYVAWTLGGPRQATIGMRVMGIRLERLDGAPVDWMLAVAHTVLFWAGNA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHH
ILTPLILLAAWFLSYKRTLHDLLLGTVVVRTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVAKTIDLREDRFSARSFDGVLTRRVIAFFIDYLLIGLLLIPVGLFVFILGIFTVGLGWL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFGILGPLTALCYVAWTLGGPRQATIGMRVMGIRLERLDGAPVDWMLAVAHTVLFWAGNA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHH
ILTPLILLAAWFLSYKRTLHDLLLGTVVVRTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA