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The map label for this gene is xylI [H]

Identifier: 110633430

GI number: 110633430

Start: 1180192

End: 1180974

Strand: Reverse

Name: xylI [H]

Synonym: Meso_1076

Alternate gene names: 110633430

Gene position: 1180974-1180192 (Counterclockwise)

Preceding gene: 110633431

Following gene: 110633425

Centisome position: 26.76

GC content: 66.03

Gene sequence:

>783_bases
ATGGACAGCGAAATCGAAACACTCGTTGACCGGATTCAGGGCCGGATATCAGGCCGAGAGCCCTGGAAGGACGTGCTGGA
GGACCAGCCCGGCCTCAGCGACGAGGATGCCTACCGCATCCAGTTCGCGCTGATCCGCCGGCTTGCCGCCGCAGGAGATC
GCGCAGTAGGCTACAAGGCCGCCTATACAAGCGCCGCCGTCCAGGCTCAACGCGGCAATGGCGGCCCCATTGCCGGCGCT
TTCCTGCAGTCGGGATTTCTGCCGGAAGGCGAGCCGATCGCCATCGTTCCGGAGCGTCGCAACGCGGTGGAGCCGGAAGT
GGCGATCCTTCTCGGCGCCGATCTTCCCGGGCCGCAGGTGACGCCGCTCGATGTCCGGCGGGCGGCCGCCCTCCTGCTGC
CGGCCATCGAAGTGGCGGTCGGCGCGCCCGGCGATCTGAAGCGCAGCCGACAGATGGTCATTGCCACCAACAAAACCGCC
GGCAGCGTTATCGTCGGCGGGCCGGGCCGCGCGCCGGACGGGATCGATCTCAGGCTAGAAGGATGCGTGATGACGATCAA
TGGCAGCCCGGCCGGGTCTGCCACGGGCGCGGAAGTAATGGGCGATCCTTACAATGCCGCCGCCTTTATCGCCAATACCG
TGCTTGCGAATGGCGGGATGCTCACAGCCGGTATGATTCTGATGACCGGCTCAATCATCGCCGCGGTGCCGATCGAGGCA
GGCGACGACGTGCGCGCCGAGTTCACGCGGCTGGGGAGCATTCATATCCGGTTTGCGAGGTGA

Upstream 100 bases:

>100_bases
GACCCCTGGATCAAGTAACCCGGCTTGGGCGAGGTCCTTCGATGAGGTGTTAGCCGCCGCTGGCTGATCCAGCGGCGGCC
TTTTTCTCGCAGAGGTTACA

Downstream 100 bases:

>100_bases
GTGGCTAGTGGCTGGCCGTCCCCTCACTTGCAATTTCTAACACTTAGCCTTCGGCTAAGATGTTGAGATCGCTTTCTCTC
CCACAAGGGGAGAGATATGG

Product: hydratase/decarboxylase

Products: NA

Alternate protein names: 4-OD [H]

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MDSEIETLVDRIQGRISGREPWKDVLEDQPGLSDEDAYRIQFALIRRLAAAGDRAVGYKAAYTSAAVQAQRGNGGPIAGA
FLQSGFLPEGEPIAIVPERRNAVEPEVAILLGADLPGPQVTPLDVRRAAALLLPAIEVAVGAPGDLKRSRQMVIATNKTA
GSVIVGGPGRAPDGIDLRLEGCVMTINGSPAGSATGAEVMGDPYNAAAFIANTVLANGGMLTAGMILMTGSIIAAVPIEA
GDDVRAEFTRLGSIHIRFAR

Sequences:

>Translated_260_residues
MDSEIETLVDRIQGRISGREPWKDVLEDQPGLSDEDAYRIQFALIRRLAAAGDRAVGYKAAYTSAAVQAQRGNGGPIAGA
FLQSGFLPEGEPIAIVPERRNAVEPEVAILLGADLPGPQVTPLDVRRAAALLLPAIEVAVGAPGDLKRSRQMVIATNKTA
GSVIVGGPGRAPDGIDLRLEGCVMTINGSPAGSATGAEVMGDPYNAAAFIANTVLANGGMLTAGMILMTGSIIAAVPIEA
GDDVRAEFTRLGSIHIRFAR
>Mature_260_residues
MDSEIETLVDRIQGRISGREPWKDVLEDQPGLSDEDAYRIQFALIRRLAAAGDRAVGYKAAYTSAAVQAQRGNGGPIAGA
FLQSGFLPEGEPIAIVPERRNAVEPEVAILLGADLPGPQVTPLDVRRAAALLLPAIEVAVGAPGDLKRSRQMVIATNKTA
GSVIVGGPGRAPDGIDLRLEGCVMTINGSPAGSATGAEVMGDPYNAAAFIANTVLANGGMLTAGMILMTGSIIAAVPIEA
GDDVRAEFTRLGSIHIRFAR

Specific function: 3-hydroxyphenylpropionate degradation. [C]

COG id: COG3971

COG function: function code Q; 2-keto-4-pentenoate hydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hydratase/decarboxylase family [H]

Homologues:

Organism=Escherichia coli, GI87081722, Length=235, Percent_Identity=31.4893617021277, Blast_Score=106, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017630
- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: =4.1.1.77 [H]

Molecular weight: Translated: 26991; Mature: 26991

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSEIETLVDRIQGRISGREPWKDVLEDQPGLSDEDAYRIQFALIRRLAAAGDRAVGYKA
CCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHH
AYTSAAVQAQRGNGGPIAGAFLQSGFLPEGEPIAIVPERRNAVEPEVAILLGADLPGPQV
HHHHHHEEEECCCCCCEEHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCC
TPLDVRRAAALLLPAIEVAVGAPGDLKRSRQMVIATNKTAGSVIVGGPGRAPDGIDLRLE
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEE
GCVMTINGSPAGSATGAEVMGDPYNAAAFIANTVLANGGMLTAGMILMTGSIIAAVPIEA
EEEEEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEECCC
GDDVRAEFTRLGSIHIRFAR
CCCHHHHHHCCCEEEEEEEC
>Mature Secondary Structure
MDSEIETLVDRIQGRISGREPWKDVLEDQPGLSDEDAYRIQFALIRRLAAAGDRAVGYKA
CCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHH
AYTSAAVQAQRGNGGPIAGAFLQSGFLPEGEPIAIVPERRNAVEPEVAILLGADLPGPQV
HHHHHHEEEECCCCCCEEHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCC
TPLDVRRAAALLLPAIEVAVGAPGDLKRSRQMVIATNKTAGSVIVGGPGRAPDGIDLRLE
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEE
GCVMTINGSPAGSATGAEVMGDPYNAAAFIANTVLANGGMLTAGMILMTGSIIAAVPIEA
EEEEEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEECCC
GDDVRAEFTRLGSIHIRFAR
CCCHHHHHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8510667 [H]