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The map label for this gene is comD [H]

Identifier: 110633405

GI number: 110633405

Start: 1155136

End: 1155663

Strand: Direct

Name: comD [H]

Synonym: Meso_1051

Alternate gene names: 110633405

Gene position: 1155136-1155663 (Clockwise)

Preceding gene: 110633396

Following gene: 110633406

Centisome position: 26.18

GC content: 63.07

Gene sequence:

>528_bases
ATGTCGGACGAACAGAGCCAGGCGGCATGGCCGCACACGATCTACCGCCTCCTGAAAGAAGCGAAGGTGGCGCAGGTCTC
CTTTGTGCCGGACGGCGGCCATAAGCAGCTCATCCAATACTGCATCGACGATCCCGATATGCGCACGATCTCGCTCACCA
CGGAGCAGGACGGCGTCGGACTTGCGACCGGAGCCTGGCTCGGCGGCGTGCGCAGCACGCTCCTCATGCAATCGAGCGGT
GTGGGCAACTGCATCAATGCGCTGTCGCTCCTGAGGAACTGCCAGATACCCTTCATCACCTTCGTCACCATGCGCGGCGA
TTTCGGCGAGACAAACGCCTGGCAGATCCCGATGGGGCAGAGCGTGAAGCCGGTTCTGGAGGAGATGGGCATGATCTGCC
TGCGCGCCGAAACGGCCGGGGACGTGGAGGAGACCGTGCGTGCCGGCCTCGCCATGGCCTTTTCCGCTCAGCAGGCGATT
GCCGTCCTGTTGTCTCAGCGCCTGATCGGCGCCAAGGTTTTCAAGTGA

Upstream 100 bases:

>100_bases
GCGAAAATGGGATGCGGGCCGAAGGAGCGGCGTTCAGGGGCCGAAGAGCGACCGGACGCATCCTGTTGCATAATTTTGAC
TGAGGAGGACCGGGGCAGGA

Downstream 100 bases:

>100_bases
GATGCCCATGACCGAGAACACCCTCAACCGCCGCGAGGCCGTGAAGCGCATCCTGGCTGATCGTGGCGATACGCTCACCG
TCTCTTCGCTCGGCGGGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSDEQSQAAWPHTIYRLLKEAKVAQVSFVPDGGHKQLIQYCIDDPDMRTISLTTEQDGVGLATGAWLGGVRSTLLMQSSG
VGNCINALSLLRNCQIPFITFVTMRGDFGETNAWQIPMGQSVKPVLEEMGMICLRAETAGDVEETVRAGLAMAFSAQQAI
AVLLSQRLIGAKVFK

Sequences:

>Translated_175_residues
MSDEQSQAAWPHTIYRLLKEAKVAQVSFVPDGGHKQLIQYCIDDPDMRTISLTTEQDGVGLATGAWLGGVRSTLLMQSSG
VGNCINALSLLRNCQIPFITFVTMRGDFGETNAWQIPMGQSVKPVLEEMGMICLRAETAGDVEETVRAGLAMAFSAQQAI
AVLLSQRLIGAKVFK
>Mature_174_residues
SDEQSQAAWPHTIYRLLKEAKVAQVSFVPDGGHKQLIQYCIDDPDMRTISLTTEQDGVGLATGAWLGGVRSTLLMQSSGV
GNCINALSLLRNCQIPFITFVTMRGDFGETNAWQIPMGQSVKPVLEEMGMICLRAETAGDVEETVRAGLAMAFSAQQAIA
VLLSQRLIGAKVFK

Specific function: Catalyzes the decarboxylation of sulfopyruvic acid to sulfoacetaldehyde [H]

COG id: COG4032

COG function: function code R; Predicted thiamine-pyrophosphate-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022502
- InterPro:   IPR012001 [H]

Pfam domain/function: PF02776 TPP_enzyme_N [H]

EC number: =4.1.1.79 [H]

Molecular weight: Translated: 18977; Mature: 18846

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEQSQAAWPHTIYRLLKEAKVAQVSFVPDGGHKQLIQYCIDDPDMRTISLTTEQDGVG
CCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCC
LATGAWLGGVRSTLLMQSSGVGNCINALSLLRNCQIPFITFVTMRGDFGETNAWQIPMGQ
EEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEECCCCC
SVKPVLEEMGMICLRAETAGDVEETVRAGLAMAFSAQQAIAVLLSQRLIGAKVFK
CHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDEQSQAAWPHTIYRLLKEAKVAQVSFVPDGGHKQLIQYCIDDPDMRTISLTTEQDGVG
CCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCC
LATGAWLGGVRSTLLMQSSGVGNCINALSLLRNCQIPFITFVTMRGDFGETNAWQIPMGQ
EEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEECCCCC
SVKPVLEEMGMICLRAETAGDVEETVRAGLAMAFSAQQAIAVLLSQRLIGAKVFK
CHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 10940029 [H]