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The map label for this gene is 110633359

Identifier: 110633359

GI number: 110633359

Start: 1102644

End: 1103090

Strand: Direct

Name: 110633359

Synonym: Meso_1005

Alternate gene names: NA

Gene position: 1102644-1103090 (Clockwise)

Preceding gene: 110633348

Following gene: 110633360

Centisome position: 24.99

GC content: 61.97

Gene sequence:

>447_bases
ATGATCGACGACGTCTATAATGCGAAAATTCTTGGCTTTGCCGGCAATATCGGCCGCATCGGCCGGCTGGCGGATCCTGA
CGCCACCGCCACGGCTCATTCCAAGCTCTGCGGCTCGACTGTAACGGTCGATCTGAAGATGGCGGACGGCGTGGTGACTG
ACTTTGCCCATGAGGTGCGCGCCTGCGCGCTTGGCCAGGCGTCGTCCTCCATTATGGCGCGAAATGTCATTGGCGCGAGT
GCCGGAGAGCTTCGGGCCGTACGGGAGAAGATGCGCCTGATGCTCAAGGAGAACGGTGCTCCGCCCGACGGCCGCTTCGC
GGATCTTAAATATCTGGAGCCGGTGCGCGACTATAAGGCTCGCCACGCCTCCACCTTGCTCACTTTCGACGCGGTGGTGG
ACTGCATAGACCAGATCGAGCGCAAGGCGGCGGAGAAGGCCGCCTGA

Upstream 100 bases:

>100_bases
CCCTCCGCCGGATACCCTCACTATATAGTTTTTGGGCGGCGCAAATGAAAGCCATTTGCGCGACATCCTGTCCCGAGTTG
GCGCCGACAGGCGGAATTTC

Downstream 100 bases:

>100_bases
TCCAATGGCCTTGCCCGCAGGATATTCCCGCAACTGGTCCGGCCCGTGGCCGAAGACGCCGGGGAGGGTGCTGGGCACCG
CTTTCGTGCGCCTCTATCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NifU Domain-Containing Protein; NifU-Like Protein; Nitrogen Fixation Protein; NifU-Like Protein Involved In Fe-S Cluster Formation; NifU-Related Protein Involved In Fe-S Cluster Formation; Nitrogen-Fixing NifU-Like Protein; NIFU-Like Protein; Fe-S Cluster Formation NifU-Like Protein; NifU-Like N Terminal Domain; Nitrogen-Fixing NifU-Like; Fe-S Cluster Formation Protein; Nitrogen-Fixing Nifu Domain Protein; Nitrogen-Fixing NifU Domain-Containing Protein; Nifu Protein; NifU-Like Involved In Fe-S Cluster Formation; Nitrogen Fixation Protein NifU

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MIDDVYNAKILGFAGNIGRIGRLADPDATATAHSKLCGSTVTVDLKMADGVVTDFAHEVRACALGQASSSIMARNVIGAS
AGELRAVREKMRLMLKENGAPPDGRFADLKYLEPVRDYKARHASTLLTFDAVVDCIDQIERKAAEKAA

Sequences:

>Translated_148_residues
MIDDVYNAKILGFAGNIGRIGRLADPDATATAHSKLCGSTVTVDLKMADGVVTDFAHEVRACALGQASSSIMARNVIGAS
AGELRAVREKMRLMLKENGAPPDGRFADLKYLEPVRDYKARHASTLLTFDAVVDCIDQIERKAAEKAA
>Mature_148_residues
MIDDVYNAKILGFAGNIGRIGRLADPDATATAHSKLCGSTVTVDLKMADGVVTDFAHEVRACALGQASSSIMARNVIGAS
AGELRAVREKMRLMLKENGAPPDGRFADLKYLEPVRDYKARHASTLLTFDAVVDCIDQIERKAAEKAA

Specific function: Unknown

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15850; Mature: 15850

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDDVYNAKILGFAGNIGRIGRLADPDATATAHSKLCGSTVTVDLKMADGVVTDFAHEVR
CCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHH
ACALGQASSSIMARNVIGASAGELRAVREKMRLMLKENGAPPDGRFADLKYLEPVRDYKA
HHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
RHASTLLTFDAVVDCIDQIERKAAEKAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIDDVYNAKILGFAGNIGRIGRLADPDATATAHSKLCGSTVTVDLKMADGVVTDFAHEVR
CCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHH
ACALGQASSSIMARNVIGASAGELRAVREKMRLMLKENGAPPDGRFADLKYLEPVRDYKA
HHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
RHASTLLTFDAVVDCIDQIERKAAEKAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA