| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633345
Identifier: 110633345
GI number: 110633345
Start: 1089455
End: 1090096
Strand: Reverse
Name: 110633345
Synonym: Meso_0991
Alternate gene names: NA
Gene position: 1090096-1089455 (Counterclockwise)
Preceding gene: 110633346
Following gene: 110633342
Centisome position: 24.71
GC content: 61.99
Gene sequence:
>642_bases ATGAAACATTCAGCTGTCGAAATCATCCGTGAATATGGTCCCTTTCCCGATGTGGACGACGTGGCCGGCGTCAGCTTCGA CGGCAGTCAGATCTGGTTCGCAGCCGGCGAAAGGCTGAACGCTCTCGATCCCGAAAGCGGGGAAATCTTGAGATCGCTCG ATGTCGCCGCCCATGCAGGGACCGCTTTCGATGGCGAGCACCTGTTCCAGATTGCCGATGCCGTGATCCGAAAAATCGAT CCCAAGACCGGCGAGGTTGTCGCCACAATACCCGCGCCCGGGCGTGGTGGTGACTCGGGGCTGGCCTGGGCGGAGGGCTC GCTCTGGGTAGGGCAGCATCGCGGGCGCAAGATCCATCAGGTGGACCCCGAGACCGGAGAAGTGCTGCGCACGATCGAAT CCGATCGATTCGTCACCGGCGTCACCTGGGTAGACGGCGAGCTTTGGCACGGCACATGGGAAGACAGCGGGAGCGAACTC CGCCATATCGACCCCGAGACAGGTGAAGTGCTCGAGCGATTGGATATGCCGCCGGGAACCGGCGTTTCAGGGCTGGAATC CGATGGCGGCGACCGCTTTTTCTGCGGAGGCGGAAGCAGCGGAAAACTAAGAGCCGTTCGTCGGCCCCGGCAGAGCCTTT GA
Upstream 100 bases:
>100_bases CGGGCGCGGGCGGGCCCGCCGCTGGATCGCTTCGAGCGTGCCGGGATTCCCGACAAGCTTGTTACTCCCCGCCGCGGGAA TTTCCAGCTAGGATAAAGAC
Downstream 100 bases:
>100_bases GCGTGGACTTACGGCCAAATGATGATCCGACGAATGGCCGCTTTTTGGTGGTGCCCCTCAAGAAGCCGACCGACAGAAAA CCACCCATCTCAGCCGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKHSAVEIIREYGPFPDVDDVAGVSFDGSQIWFAAGERLNALDPESGEILRSLDVAAHAGTAFDGEHLFQIADAVIRKID PKTGEVVATIPAPGRGGDSGLAWAEGSLWVGQHRGRKIHQVDPETGEVLRTIESDRFVTGVTWVDGELWHGTWEDSGSEL RHIDPETGEVLERLDMPPGTGVSGLESDGGDRFFCGGGSSGKLRAVRRPRQSL
Sequences:
>Translated_213_residues MKHSAVEIIREYGPFPDVDDVAGVSFDGSQIWFAAGERLNALDPESGEILRSLDVAAHAGTAFDGEHLFQIADAVIRKID PKTGEVVATIPAPGRGGDSGLAWAEGSLWVGQHRGRKIHQVDPETGEVLRTIESDRFVTGVTWVDGELWHGTWEDSGSEL RHIDPETGEVLERLDMPPGTGVSGLESDGGDRFFCGGGSSGKLRAVRRPRQSL >Mature_213_residues MKHSAVEIIREYGPFPDVDDVAGVSFDGSQIWFAAGERLNALDPESGEILRSLDVAAHAGTAFDGEHLFQIADAVIRKID PKTGEVVATIPAPGRGGDSGLAWAEGSLWVGQHRGRKIHQVDPETGEVLRTIESDRFVTGVTWVDGELWHGTWEDSGSEL RHIDPETGEVLERLDMPPGTGVSGLESDGGDRFFCGGGSSGKLRAVRRPRQSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22954; Mature: 22954
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHSAVEIIREYGPFPDVDDVAGVSFDGSQIWFAAGERLNALDPESGEILRSLDVAAHAG CCHHHHHHHHHHCCCCCCHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCC TAFDGEHLFQIADAVIRKIDPKTGEVVATIPAPGRGGDSGLAWAEGSLWVGQHRGRKIHQ CCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECCCEEECCCCCCEEEE VDPETGEVLRTIESDRFVTGVTWVDGELWHGTWEDSGSELRHIDPETGEVLERLDMPPGT CCCCHHHHHHHHCCCCEEEEEEEECCEEECCCCCCCCCCCEECCCCHHHHHHHHCCCCCC GVSGLESDGGDRFFCGGGSSGKLRAVRRPRQSL CCCCCCCCCCCEEEECCCCCCCCHHHCCHHHCC >Mature Secondary Structure MKHSAVEIIREYGPFPDVDDVAGVSFDGSQIWFAAGERLNALDPESGEILRSLDVAAHAG CCHHHHHHHHHHCCCCCCHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCC TAFDGEHLFQIADAVIRKIDPKTGEVVATIPAPGRGGDSGLAWAEGSLWVGQHRGRKIHQ CCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECCCEEECCCCCCEEEE VDPETGEVLRTIESDRFVTGVTWVDGELWHGTWEDSGSELRHIDPETGEVLERLDMPPGT CCCCHHHHHHHHCCCCEEEEEEEECCEEECCCCCCCCCCCEECCCCHHHHHHHHCCCCCC GVSGLESDGGDRFFCGGGSSGKLRAVRRPRQSL CCCCCCCCCCCEEEECCCCCCCCHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA