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The map label for this gene is recJ [H]

Identifier: 110633344

GI number: 110633344

Start: 1087552

End: 1089336

Strand: Direct

Name: recJ [H]

Synonym: Meso_0990

Alternate gene names: 110633344

Gene position: 1087552-1089336 (Clockwise)

Preceding gene: 110633343

Following gene: 110633347

Centisome position: 24.65

GC content: 65.55

Gene sequence:

>1785_bases
TTGAGCGGCGAGAAGCGATATTTCCTGGGCGTGAGACAGTCCGCGCGGGGTGTGAGCTGGGAACACCGGCTCGACTCGCG
CGGTGAGAACGTCGCGCTTGGAATTGCGCAGAGCCACGGCGTGCCTGAGATCGTGGCGCGCGTGCTCGCAGGCCGCGGCG
TCGCGCTTGAGGAGGCGGAACGTTTTCTGACTCCTTCCATCCGCGACCTGCTGCCCGACCCGGCCGGACTGACCGATATG
GAGAAGGCGGCCCGCCGCATAGCGGACGCGGTGCATGCCGGGGAGCGCGTGGCGATCTTCGGAGATTACGATGTCGACGG
CGCGGTCTCCTCTGCCATCCTGAAGCGCTTTCTGGCCCACTACGGCGTCACGGCGGAGATTTATATCCCCGATCGCCTTT
TCGAGGGATACGGCCCCAATCCCGATGCCATGCGCGAACTGATCCGTCGTGGCGCAAAGCTGATCGTCACCGTGGACTGC
GGCACCAACAGCGCTCCTTCCATAGCCGCCGCCAATGAAATGGGCGCGGAAGTCGTCGTGCTGGATCATCATCAGGTGGG
AGGCGACCTGCCCGAGGCCGTTGCCATCGTGAATCCGAACCGCGAGGATGACCTTTCCGGCCAGGGACATTTGTGCGCCG
CGGGGGTCGTCTTCCTCGCCCTGGTACAGACCACCCGCATCTTGAGGGAGGAGCTGCGCGCCACGCCGCCGCCGGATCTT
CTTTCCATGCTCGATCTGGTGGCGCTTGCCACAGTCTGCGATGTGGTGCCGCTGGTCGGCGTCAACCGCGCATTCGTGGC
AAAGGGCCTGCTTGCGGCGCGGCAGATGAGAACGCCGGGCCTTTCCGCGCTCGCCAGGGTGGCGCGTATCGGTGAACCGC
TCAATTGCCATCACCTGGGTTTTCTTCTGGGGCCGCGCATTAATGCTGGCGGGCGCATCGGGAATGCGGCCTTGGGCAGC
CTGCTGCTCGCCACCGTGGAGCCGGGCGAAGCGGAATCGATCGCCGCCACGCTCGATCGTCTGAACCAGGAGCGCCAGGC
GATGGAGACGGCCATGCTGGCCGAAGCGCGGGCGGAGGCGGATGCCGAACTGATGAGCGGAGATGGACCCGCCGTGCTGG
TGACGGCAAGCGACACCTGGCACCCCGGAATTGTCGGGCTGATTGCCTCGCGGCTCAAGGACCACGCGCGCCGGCCCACA
TTTGCGATCGCCTTCGACATGAATGGCATGGGCACGGGCTCCGGCCGGTCCATTACGGGCTTTGATCTCGGCCGGCTGGT
GCGCGACGCGGTCTCCGAGGGACTTCTCGTCAAAGGCGGCGGACATGCCATGGCGGCGGGGATTACGGTCGAGCGGAAGA
AGCTCGGCGCCTTGCGTGCATTCTTTGAGGAGAAGGCCGCCGGCGCCGTTTCGCTTCTGCGCCAGTCCGAAAGCCTCAGG
ATCGATGCCGCCCTTTCGGCGGAAGGCGCAACGCTGGAGCTTCTGGAGACCTTGGAGGCAGCCGGCCCGTATGGTTCCGG
TCATCCGGCTCCTGTGTTGGCTTTGCCGCGCCATCGGCTGGCCGATGCGAAACTGGTCGGCAACGGCCACATCCGCGCCG
ATCTAAGGTCGCTCTCTGGCGCTCGCCTCCAGGCGATCGCCTTCCGTGCCGCCGAAACGGATCTGGGGAATTTTCTTTTC
GCAAGCCGCGGAGCTTCGGTCCATGTGGCCGGAACGCTCGCCGTCAACCACTGGAATGGCAGCCGCTCCGTGCAATTCCG
CATCACGGATGCGGCAAGGGATTAG

Upstream 100 bases:

>100_bases
TAGGACGCACAAAGGACGCTGTTATTGATTCTACGCATCGTGCTTTCCGAAAACCGATCCCGGTTTTCGAGCCGATGCGC
TAGAACGGACGGAGACTGGT

Downstream 100 bases:

>100_bases
CCTGCGAATCCAAAAACGCGAACGGCTGAGATGGGTGGTTTTCTGTCGGTCGGCTTCTTGAGGGGCACCACCAAAAAGCG
GCCATTCGTCGGATCATCAT

Product: exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 594; Mature: 593

Protein sequence:

>594_residues
MSGEKRYFLGVRQSARGVSWEHRLDSRGENVALGIAQSHGVPEIVARVLAGRGVALEEAERFLTPSIRDLLPDPAGLTDM
EKAARRIADAVHAGERVAIFGDYDVDGAVSSAILKRFLAHYGVTAEIYIPDRLFEGYGPNPDAMRELIRRGAKLIVTVDC
GTNSAPSIAAANEMGAEVVVLDHHQVGGDLPEAVAIVNPNREDDLSGQGHLCAAGVVFLALVQTTRILREELRATPPPDL
LSMLDLVALATVCDVVPLVGVNRAFVAKGLLAARQMRTPGLSALARVARIGEPLNCHHLGFLLGPRINAGGRIGNAALGS
LLLATVEPGEAESIAATLDRLNQERQAMETAMLAEARAEADAELMSGDGPAVLVTASDTWHPGIVGLIASRLKDHARRPT
FAIAFDMNGMGTGSGRSITGFDLGRLVRDAVSEGLLVKGGGHAMAAGITVERKKLGALRAFFEEKAAGAVSLLRQSESLR
IDAALSAEGATLELLETLEAAGPYGSGHPAPVLALPRHRLADAKLVGNGHIRADLRSLSGARLQAIAFRAAETDLGNFLF
ASRGASVHVAGTLAVNHWNGSRSVQFRITDAARD

Sequences:

>Translated_594_residues
MSGEKRYFLGVRQSARGVSWEHRLDSRGENVALGIAQSHGVPEIVARVLAGRGVALEEAERFLTPSIRDLLPDPAGLTDM
EKAARRIADAVHAGERVAIFGDYDVDGAVSSAILKRFLAHYGVTAEIYIPDRLFEGYGPNPDAMRELIRRGAKLIVTVDC
GTNSAPSIAAANEMGAEVVVLDHHQVGGDLPEAVAIVNPNREDDLSGQGHLCAAGVVFLALVQTTRILREELRATPPPDL
LSMLDLVALATVCDVVPLVGVNRAFVAKGLLAARQMRTPGLSALARVARIGEPLNCHHLGFLLGPRINAGGRIGNAALGS
LLLATVEPGEAESIAATLDRLNQERQAMETAMLAEARAEADAELMSGDGPAVLVTASDTWHPGIVGLIASRLKDHARRPT
FAIAFDMNGMGTGSGRSITGFDLGRLVRDAVSEGLLVKGGGHAMAAGITVERKKLGALRAFFEEKAAGAVSLLRQSESLR
IDAALSAEGATLELLETLEAAGPYGSGHPAPVLALPRHRLADAKLVGNGHIRADLRSLSGARLQAIAFRAAETDLGNFLF
ASRGASVHVAGTLAVNHWNGSRSVQFRITDAARD
>Mature_593_residues
SGEKRYFLGVRQSARGVSWEHRLDSRGENVALGIAQSHGVPEIVARVLAGRGVALEEAERFLTPSIRDLLPDPAGLTDME
KAARRIADAVHAGERVAIFGDYDVDGAVSSAILKRFLAHYGVTAEIYIPDRLFEGYGPNPDAMRELIRRGAKLIVTVDCG
TNSAPSIAAANEMGAEVVVLDHHQVGGDLPEAVAIVNPNREDDLSGQGHLCAAGVVFLALVQTTRILREELRATPPPDLL
SMLDLVALATVCDVVPLVGVNRAFVAKGLLAARQMRTPGLSALARVARIGEPLNCHHLGFLLGPRINAGGRIGNAALGSL
LLATVEPGEAESIAATLDRLNQERQAMETAMLAEARAEADAELMSGDGPAVLVTASDTWHPGIVGLIASRLKDHARRPTF
AIAFDMNGMGTGSGRSITGFDLGRLVRDAVSEGLLVKGGGHAMAAGITVERKKLGALRAFFEEKAAGAVSLLRQSESLRI
DAALSAEGATLELLETLEAAGPYGSGHPAPVLALPRHRLADAKLVGNGHIRADLRSLSGARLQAIAFRAAETDLGNFLFA
SRGASVHVAGTLAVNHWNGSRSVQFRITDAARD

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=567, Percent_Identity=36.5079365079365, Blast_Score=274, Evalue=1e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 62630; Mature: 62499

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGEKRYFLGVRQSARGVSWEHRLDSRGENVALGIAQSHGVPEIVARVLAGRGVALEEAE
CCCCCEEEEEECCCCCCCCHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCHHHHH
RFLTPSIRDLLPDPAGLTDMEKAARRIADAVHAGERVAIFGDYDVDGAVSSAILKRFLAH
HHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHH
YGVTAEIYIPDRLFEGYGPNPDAMRELIRRGAKLIVTVDCGTNSAPSIAAANEMGAEVVV
CCCEEEEEECHHHHCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCEEHHHCCCEEEE
LDHHQVGGDLPEAVAIVNPNREDDLSGQGHLCAAGVVFLALVQTTRILREELRATPPPDL
EECHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LSMLDLVALATVCDVVPLVGVNRAFVAKGLLAARQMRTPGLSALARVARIGEPLNCHHLG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHH
FLLGPRINAGGRIGNAALGSLLLATVEPGEAESIAATLDRLNQERQAMETAMLAEARAEA
HEECCCCCCCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DAELMSGDGPAVLVTASDTWHPGIVGLIASRLKDHARRPTFAIAFDMNGMGTGSGRSITG
CHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEECC
FDLGRLVRDAVSEGLLVKGGGHAMAAGITVERKKLGALRAFFEEKAAGAVSLLRQSESLR
HHHHHHHHHHHHCCEEEECCCCEEEECEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
IDAALSAEGATLELLETLEAAGPYGSGHPAPVLALPRHRLADAKLVGNGHIRADLRSLSG
EEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEEECCCCEEHHHHHCCC
ARLQAIAFRAAETDLGNFLFASRGASVHVAGTLAVNHWNGSRSVQFRITDAARD
CHHHHHHHHHHHCCCCHHHEECCCCEEEEEEEEEEEECCCCCEEEEEEECCCCC
>Mature Secondary Structure 
SGEKRYFLGVRQSARGVSWEHRLDSRGENVALGIAQSHGVPEIVARVLAGRGVALEEAE
CCCCEEEEEECCCCCCCCHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCHHHHH
RFLTPSIRDLLPDPAGLTDMEKAARRIADAVHAGERVAIFGDYDVDGAVSSAILKRFLAH
HHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHH
YGVTAEIYIPDRLFEGYGPNPDAMRELIRRGAKLIVTVDCGTNSAPSIAAANEMGAEVVV
CCCEEEEEECHHHHCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCEEHHHCCCEEEE
LDHHQVGGDLPEAVAIVNPNREDDLSGQGHLCAAGVVFLALVQTTRILREELRATPPPDL
EECHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LSMLDLVALATVCDVVPLVGVNRAFVAKGLLAARQMRTPGLSALARVARIGEPLNCHHLG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHH
FLLGPRINAGGRIGNAALGSLLLATVEPGEAESIAATLDRLNQERQAMETAMLAEARAEA
HEECCCCCCCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DAELMSGDGPAVLVTASDTWHPGIVGLIASRLKDHARRPTFAIAFDMNGMGTGSGRSITG
CHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEECC
FDLGRLVRDAVSEGLLVKGGGHAMAAGITVERKKLGALRAFFEEKAAGAVSLLRQSESLR
HHHHHHHHHHHHCCEEEECCCCEEEECEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
IDAALSAEGATLELLETLEAAGPYGSGHPAPVLALPRHRLADAKLVGNGHIRADLRSLSG
EEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEEECCCCEEHHHHHCCC
ARLQAIAFRAAETDLGNFLFASRGASVHVAGTLAVNHWNGSRSVQFRITDAARD
CHHHHHHHHHHHCCCCHHHEECCCCEEEEEEEEEEEECCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]