| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is pssA [H]
Identifier: 110633333
GI number: 110633333
Start: 1075260
End: 1076072
Strand: Direct
Name: pssA [H]
Synonym: Meso_0979
Alternate gene names: 110633333
Gene position: 1075260-1076072 (Clockwise)
Preceding gene: 110633332
Following gene: 110633336
Centisome position: 24.37
GC content: 62.12
Gene sequence:
>813_bases ATGTCGGGTCCTTTTCCTCCCTTCGAGCCTCATGGCGGAGGCGGACGCCGCATCCGTGAAATCCCGCTGCGCCTGATGGT CCCGAACTTGATCACAGTGCTTGCCATATGCGCGGGGTTGTCCGGCATCCGGCTCGCATTCGAGCACCGCATGGAACTGG CGGTGATCATGGTGCTGATCGCCGCCTTTCTCGACGCGGTCGACGGGCGGGTGGCGCGCGTGCTGAAGGCATCGTCCAAA TTCGGCGAGCAGATGGACTCGCTCGCCGATATCGTCAACTTCGGCGTGGCGCCCAGCCTGGTGCTCTACGCCTCTCTTCT CGATAGGGCAGGGGCCATCGGATGGATCGCGGCGCTTCTCTTCGCAATCGCCTGCGGCTTGAGGCTTGCGCGCTTTAACG TGATGCTGGACGACCCCAATCGCCCTGCCTGGCAAATGGACTATTTCGTAGGCGTTCCCGCCCCGGCGGGGGCGGTGCTG GTCATGCTGCCGGTCTATCTGGGCTTTCTTGGGCTGGAGGCGAGCCGCCCGGTGGCTTTGGCCGCCTGCGCTTATACGCT TGCCATCGCGTTTTTGATGGTAAGCCGCTTGCCCGTCTATTCGGGCAAGGCTTCGGGCAGCCGCGTGAGGCGGGAGTTTG CCATTCCACTGATGCTGGGCATCGTCTTCTATGCGCTGCTGCTTGCCAGCTACACCTGGCTTACAATGGCGATTTCAGCG ATCATCTATCTCGTTTCGCTCATCTGGAGTGCCCGCGCCTATTCGCGACGCGTTGAACTCGAGGAGAAAGCCGCTGCGAA AGAGGGTGGCTGA
Upstream 100 bases:
>100_bases CACGCCCGCGTGTAGCAGTGGGGCAGGTCTCCGTGGGCGGCGAGACAATCATCGCCGAATTCGGCAGCAACGCACCTCCT CCTCTGGTAAGAGTTTCCTG
Downstream 100 bases:
>100_bases GCGCGTCCTGATCAGGCTGGCTCGTGCACTTCTTCCCGCGCAACGCCCTGACGGCGCACCGCAAGCATCCGATCGAAGAA GGCGTTCGCCCCCCTCGGCT
Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MSGPFPPFEPHGGGGRRIREIPLRLMVPNLITVLAICAGLSGIRLAFEHRMELAVIMVLIAAFLDAVDGRVARVLKASSK FGEQMDSLADIVNFGVAPSLVLYASLLDRAGAIGWIAALLFAIACGLRLARFNVMLDDPNRPAWQMDYFVGVPAPAGAVL VMLPVYLGFLGLEASRPVALAACAYTLAIAFLMVSRLPVYSGKASGSRVRREFAIPLMLGIVFYALLLASYTWLTMAISA IIYLVSLIWSARAYSRRVELEEKAAAKEGG
Sequences:
>Translated_270_residues MSGPFPPFEPHGGGGRRIREIPLRLMVPNLITVLAICAGLSGIRLAFEHRMELAVIMVLIAAFLDAVDGRVARVLKASSK FGEQMDSLADIVNFGVAPSLVLYASLLDRAGAIGWIAALLFAIACGLRLARFNVMLDDPNRPAWQMDYFVGVPAPAGAVL VMLPVYLGFLGLEASRPVALAACAYTLAIAFLMVSRLPVYSGKASGSRVRREFAIPLMLGIVFYALLLASYTWLTMAISA IIYLVSLIWSARAYSRRVELEEKAAAKEGG >Mature_269_residues SGPFPPFEPHGGGGRRIREIPLRLMVPNLITVLAICAGLSGIRLAFEHRMELAVIMVLIAAFLDAVDGRVARVLKASSKF GEQMDSLADIVNFGVAPSLVLYASLLDRAGAIGWIAALLFAIACGLRLARFNVMLDDPNRPAWQMDYFVGVPAPAGAVLV MLPVYLGFLGLEASRPVALAACAYTLAIAFLMVSRLPVYSGKASGSRVRREFAIPLMLGIVFYALLLASYTWLTMAISAI IYLVSLIWSARAYSRRVELEEKAAAKEGG
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=122, Percent_Identity=37.7049180327869, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 29118; Mature: 28987
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPFPPFEPHGGGGRRIREIPLRLMVPNLITVLAICAGLSGIRLAFEHRMELAVIMVLI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AAFLDAVDGRVARVLKASSKFGEQMDSLADIVNFGVAPSLVLYASLLDRAGAIGWIAALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHH FAIACGLRLARFNVMLDDPNRPAWQMDYFVGVPAPAGAVLVMLPVYLGFLGLEASRPVAL HHHHHHHHHHHHEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHH AACAYTLAIAFLMVSRLPVYSGKASGSRVRREFAIPLMLGIVFYALLLASYTWLTMAISA HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIYLVSLIWSARAYSRRVELEEKAAAKEGG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SGPFPPFEPHGGGGRRIREIPLRLMVPNLITVLAICAGLSGIRLAFEHRMELAVIMVLI CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AAFLDAVDGRVARVLKASSKFGEQMDSLADIVNFGVAPSLVLYASLLDRAGAIGWIAALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHH FAIACGLRLARFNVMLDDPNRPAWQMDYFVGVPAPAGAVLVMLPVYLGFLGLEASRPVAL HHHHHHHHHHHHEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHH AACAYTLAIAFLMVSRLPVYSGKASGSRVRREFAIPLMLGIVFYALLLASYTWLTMAISA HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIYLVSLIWSARAYSRRVELEEKAAAKEGG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]