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The map label for this gene is omp2a [H]

Identifier: 110633293

GI number: 110633293

Start: 1035474

End: 1036679

Strand: Direct

Name: omp2a [H]

Synonym: Meso_0939

Alternate gene names: 110633293

Gene position: 1035474-1036679 (Clockwise)

Preceding gene: 110633290

Following gene: 110633295

Centisome position: 23.47

GC content: 62.19

Gene sequence:

>1206_bases
ATGGGGCAGGGAAAGCTGTCCTTCAGCAAAAAATACCCAGACCCTTTCTTTAGAACCTTTGACTGGAGGTCAGAAATGAA
CATTAAGAGCCTTCTGATTGGCTCCGCGACTCTTTCAGCAGTCGCGACGGGCGCCCAGGCGGCCGATGCCATCGTCGTTC
CGGAGCCGGAGCCGATGGAATACGTGCGCGTCTGCGACGTCTATGGCGCAGGCTTCTTCTACATTCCGGGGACCGAGACC
TGCCTCAAGATCGGCGGCTATGTCCGTTACGAGATGGGCTACTCCGATGGCGACATTTCCGAGCAGGACGGCTGGAGCAA
GCTGGCCCGCGCTACGGTGACCCTCGATGCCCGTTCCGAGACCGAGTACGGCACGCTGGGCGGCTTCATCGAGCTGCGCT
TCGAGAGCCGTGGCGGCACCGTGACGGAATTCGCTGGCGGCGTTAACGAGGAAGAAGCCCTTTCGAATGGTATCCTGGAC
ACGACCTCGCGCGTGCAGCAGGCGATCATCTCCCTGGGCGGTCTCTCCATGGGTGTCGCGGACACGCTCTATGACGCCGG
CCTTTCGGCTGAGTTCGATCGTGGCGGCGGCGACCGTGCGCACTTCATCCGCTACACCTTCGACGGCGGCAGCGGCTTCA
CGGCTGCGGTGGCTCTCGAAGAGGTCGATCGTGGCCATGACTGGACGCCGAATGTCGTCGGCAAAGTCGGCTTCACCCAG
GGCTGGGGTGGCGTAAACCTGTGGGGCGCCTATGACGCCACTGCCGGTGAGTTCGCCCTCAAGGCCATTGCCAAGGCTGA
CCTGACCGAGGCTGTGTGGCTCGAAGCCATCGGCACCTATGAAAGCGGCATCAACTTCTACTCGGTTGACCCGGACAACA
GCACCGGCGGCGACTTCTTCGGCGGCACGGCACTCGCTGGCTACCGCGAAGGTGCCCAGTGGTCCGCTGGTGGCTTGATC
GGCTACAAGTTCAACCCGCGCTTCAAGGCCTCGATCGGTGCTCAGTACTTCAACGAGGTTGGGCATGAAGCCGGCACCGC
GCTTTACGGCGGTGAGGTTGATGCGCTCCGCGCTGGCGCCACGATCGACTACGCGATCGTCGAGAACTTCAACGCCAAGC
TGGCCATCAACTACACCACCTTCGACACGCCGGCTGGCGATCTCGACCAGTGGCACGGCTTCCTGCGGTTCGACCGCAAC
TTCTAA

Upstream 100 bases:

>100_bases
GCTCGTTCTGCCGGTTATGATGGTTGAACGCTGCTGCGTCCTGGGTAATGTCAACCGCGGAGAAGGGGCGCCAGGGGGCG
CAACTTTTCACACGTTGGGG

Downstream 100 bases:

>100_bases
TCTGATTTAGAAGAAAGCCTAAAAGACCCGGCGGGCTTGCCCGCCGGGTTTTTCTTTGAAGAACGCTTTGTTGTCGCGAT
AAATGATCTGCTCTTCAGCG

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MGQGKLSFSKKYPDPFFRTFDWRSEMNIKSLLIGSATLSAVATGAQAADAIVVPEPEPMEYVRVCDVYGAGFFYIPGTET
CLKIGGYVRYEMGYSDGDISEQDGWSKLARATVTLDARSETEYGTLGGFIELRFESRGGTVTEFAGGVNEEEALSNGILD
TTSRVQQAIISLGGLSMGVADTLYDAGLSAEFDRGGGDRAHFIRYTFDGGSGFTAAVALEEVDRGHDWTPNVVGKVGFTQ
GWGGVNLWGAYDATAGEFALKAIAKADLTEAVWLEAIGTYESGINFYSVDPDNSTGGDFFGGTALAGYREGAQWSAGGLI
GYKFNPRFKASIGAQYFNEVGHEAGTALYGGEVDALRAGATIDYAIVENFNAKLAINYTTFDTPAGDLDQWHGFLRFDRN
F

Sequences:

>Translated_401_residues
MGQGKLSFSKKYPDPFFRTFDWRSEMNIKSLLIGSATLSAVATGAQAADAIVVPEPEPMEYVRVCDVYGAGFFYIPGTET
CLKIGGYVRYEMGYSDGDISEQDGWSKLARATVTLDARSETEYGTLGGFIELRFESRGGTVTEFAGGVNEEEALSNGILD
TTSRVQQAIISLGGLSMGVADTLYDAGLSAEFDRGGGDRAHFIRYTFDGGSGFTAAVALEEVDRGHDWTPNVVGKVGFTQ
GWGGVNLWGAYDATAGEFALKAIAKADLTEAVWLEAIGTYESGINFYSVDPDNSTGGDFFGGTALAGYREGAQWSAGGLI
GYKFNPRFKASIGAQYFNEVGHEAGTALYGGEVDALRAGATIDYAIVENFNAKLAINYTTFDTPAGDLDQWHGFLRFDRN
F
>Mature_400_residues
GQGKLSFSKKYPDPFFRTFDWRSEMNIKSLLIGSATLSAVATGAQAADAIVVPEPEPMEYVRVCDVYGAGFFYIPGTETC
LKIGGYVRYEMGYSDGDISEQDGWSKLARATVTLDARSETEYGTLGGFIELRFESRGGTVTEFAGGVNEEEALSNGILDT
TSRVQQAIISLGGLSMGVADTLYDAGLSAEFDRGGGDRAHFIRYTFDGGSGFTAAVALEEVDRGHDWTPNVVGKVGFTQG
WGGVNLWGAYDATAGEFALKAIAKADLTEAVWLEAIGTYESGINFYSVDPDNSTGGDFFGGTALAGYREGAQWSAGGLIG
YKFNPRFKASIGAQYFNEVGHEAGTALYGGEVDALRAGATIDYAIVENFNAKLAINYTTFDTPAGDLDQWHGFLRFDRNF

Specific function: Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alphaproteobacteria porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003684 [H]

Pfam domain/function: PF02530 Porin_2 [H]

EC number: NA

Molecular weight: Translated: 43079; Mature: 42948

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQGKLSFSKKYPDPFFRTFDWRSEMNIKSLLIGSATLSAVATGAQAADAIVVPEPEPME
CCCCCCCCCCCCCCHHHEEECCCCCCCHHHEEECHHHHHHHHCCCHHCCEEECCCCCCHH
YVRVCDVYGAGFFYIPGTETCLKIGGYVRYEMGYSDGDISEQDGWSKLARATVTLDARSE
HHHHHHHHCCCEEEECCCHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHEEEEEEECCCC
TEYGTLGGFIELRFESRGGTVTEFAGGVNEEEALSNGILDTTSRVQQAIISLGGLSMGVA
CCCCCCCCEEEEEEECCCCEEHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHH
DTLYDAGLSAEFDRGGGDRAHFIRYTFDGGSGFTAAVALEEVDRGHDWTPNVVGKVGFTQ
HHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEHHHHCCCCCCCCHHCCCCCCC
GWGGVNLWGAYDATAGEFALKAIAKADLTEAVWLEAIGTYESGINFYSVDPDNSTGGDFF
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
GGTALAGYREGAQWSAGGLIGYKFNPRFKASIGAQYFNEVGHEAGTALYGGEVDALRAGA
CCCEECCCCCCCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHCCEEECCCHHHEECCC
TIDYAIVENFNAKLAINYTTFDTPAGDLDQWHGFLRFDRNF
EEEEEEEECCCCEEEEEEEECCCCCCCHHHHCCEEEECCCC
>Mature Secondary Structure 
GQGKLSFSKKYPDPFFRTFDWRSEMNIKSLLIGSATLSAVATGAQAADAIVVPEPEPME
CCCCCCCCCCCCCHHHEEECCCCCCCHHHEEECHHHHHHHHCCCHHCCEEECCCCCCHH
YVRVCDVYGAGFFYIPGTETCLKIGGYVRYEMGYSDGDISEQDGWSKLARATVTLDARSE
HHHHHHHHCCCEEEECCCHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHEEEEEEECCCC
TEYGTLGGFIELRFESRGGTVTEFAGGVNEEEALSNGILDTTSRVQQAIISLGGLSMGVA
CCCCCCCCEEEEEEECCCCEEHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHH
DTLYDAGLSAEFDRGGGDRAHFIRYTFDGGSGFTAAVALEEVDRGHDWTPNVVGKVGFTQ
HHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEHHHHCCCCCCCCHHCCCCCCC
GWGGVNLWGAYDATAGEFALKAIAKADLTEAVWLEAIGTYESGINFYSVDPDNSTGGDFF
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
GGTALAGYREGAQWSAGGLIGYKFNPRFKASIGAQYFNEVGHEAGTALYGGEVDALRAGA
CCCEECCCCCCCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHCCEEECCCHHHEECCC
TIDYAIVENFNAKLAINYTTFDTPAGDLDQWHGFLRFDRNF
EEEEEEEECCCCEEEEEEEECCCCCCCHHHHCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA