| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633268
Identifier: 110633268
GI number: 110633268
Start: 1012707
End: 1013714
Strand: Reverse
Name: 110633268
Synonym: Meso_0914
Alternate gene names: NA
Gene position: 1013714-1012707 (Counterclockwise)
Preceding gene: 110633270
Following gene: 110633264
Centisome position: 22.97
GC content: 61.81
Gene sequence:
>1008_bases ATGACCCAGCATCGCCGATCCAACCTTTTTGCCGCAGCCATATGGGTGGCCGCATTGCTTCTATCGGTTCCGCTGGTTCT CGGTTTACTAAAATATGTTCACCCTGCCTTCGACTCCTTTGCGCATCTGCGCGCGCATCTTGCCGTTCTCCTAGCCCTCA CCGCCTTTCCCCTGCTCCTTCTTGCAAGATGGCGCGCCTATGGAGCGCTTGCACTCGCGCTTGCAATAATGGCTTTCACG AGCGTGCTGGATATATCTCTTCTGCACCGGTTTTCCGGCAGCAAGGCCGAGGCTTCCGCTCCGCCAGGGCCATATTATCG CCTGCTGCAGCTCAACCTGCGCTTTGACAACCTCACGCCCAAGGAGGTGCTTTCCCTGATCGGCCGCAGCAACGCCGATG TGGTGACGCTTGAGGAGGTGTCAGGCATGTGGCGGCGGGAGCTGTCCTTCATCGAAAAAGCCTATCCCTATCGTCAGTTC TGCCCCCGGCCGGGTGTCGGCGGCGTAGCGATCCTCTCGCGGCGGCCATTTCTGCACCCGTCCACCGCGAAATGCCTCAA TCGGCACGCATTGGCCATCGCCACCATCAATTTCGGCGGTGCGGCCGTCGATGTCGTAGCGCTCCATTTGGGCTGGCCCT GGCCGTTCGAGCAGTCCCAGCAGATCGGTCCGGTGGCGAAGACCCTCGAAACCAAACTGGGCTCGAGCGCAATCCTTGCC GGCGACCTGAATGCGGCTCCCTGGAGCGCTACTGCCGAGCGGCTTGCGAAGGCGGGCGGATTCACGAGGCTTCGGCATAT CGGGCCGACCTGGCTCGCACGGAACTTGCCCGATTGGCTGCGCAGAACCGCCGGGTTGCCCATCGACAATATCTTCGTGA AGGGCCGCGTGGCGGTGCTCCAAACGAAACGGCTGGAAAGCGTCGGCTCCGACCACCTGCCGCTGTTGGTGGAGTTCAGC CTTCTGCCCGGACCGCAGCAGGAGCCTGTATTCCAGGCAGGGCTCTGA
Upstream 100 bases:
>100_bases CACCAGCTTTTGATTTGCCTTGCCCGCATGCATTTCGCCCCTTACCCATGCCACAATTGCGCCGCTACAGCGTCCATACC GAAACCAATAACGCCGAAGC
Downstream 100 bases:
>100_bases GGAGCATTCGCAGCGGCGTCGGTTCAGCCTGGCCTGCTGCCGTTCGTTGCCGTGGCGGAAATGGCAGGCGGCGCCATCGC TTGCCGGTTTTGGCCGAGAA
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Transmembrane Exo/Endo Phosphatase Family Protein; Endonuclease/Exonuclease/Phosphatase Family; Integral Membrane Protein; Transmembrane Exo/Endo Phosphatase Protein
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTQHRRSNLFAAAIWVAALLLSVPLVLGLLKYVHPAFDSFAHLRAHLAVLLALTAFPLLLLARWRAYGALALALAIMAFT SVLDISLLHRFSGSKAEASAPPGPYYRLLQLNLRFDNLTPKEVLSLIGRSNADVVTLEEVSGMWRRELSFIEKAYPYRQF CPRPGVGGVAILSRRPFLHPSTAKCLNRHALAIATINFGGAAVDVVALHLGWPWPFEQSQQIGPVAKTLETKLGSSAILA GDLNAAPWSATAERLAKAGGFTRLRHIGPTWLARNLPDWLRRTAGLPIDNIFVKGRVAVLQTKRLESVGSDHLPLLVEFS LLPGPQQEPVFQAGL
Sequences:
>Translated_335_residues MTQHRRSNLFAAAIWVAALLLSVPLVLGLLKYVHPAFDSFAHLRAHLAVLLALTAFPLLLLARWRAYGALALALAIMAFT SVLDISLLHRFSGSKAEASAPPGPYYRLLQLNLRFDNLTPKEVLSLIGRSNADVVTLEEVSGMWRRELSFIEKAYPYRQF CPRPGVGGVAILSRRPFLHPSTAKCLNRHALAIATINFGGAAVDVVALHLGWPWPFEQSQQIGPVAKTLETKLGSSAILA GDLNAAPWSATAERLAKAGGFTRLRHIGPTWLARNLPDWLRRTAGLPIDNIFVKGRVAVLQTKRLESVGSDHLPLLVEFS LLPGPQQEPVFQAGL >Mature_334_residues TQHRRSNLFAAAIWVAALLLSVPLVLGLLKYVHPAFDSFAHLRAHLAVLLALTAFPLLLLARWRAYGALALALAIMAFTS VLDISLLHRFSGSKAEASAPPGPYYRLLQLNLRFDNLTPKEVLSLIGRSNADVVTLEEVSGMWRRELSFIEKAYPYRQFC PRPGVGGVAILSRRPFLHPSTAKCLNRHALAIATINFGGAAVDVVALHLGWPWPFEQSQQIGPVAKTLETKLGSSAILAG DLNAAPWSATAERLAKAGGFTRLRHIGPTWLARNLPDWLRRTAGLPIDNIFVKGRVAVLQTKRLESVGSDHLPLLVEFSL LPGPQQEPVFQAGL
Specific function: Unknown
COG id: COG3021
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36643; Mature: 36512
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQHRRSNLFAAAIWVAALLLSVPLVLGLLKYVHPAFDSFAHLRAHLAVLLALTAFPLLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LARWRAYGALALALAIMAFTSVLDISLLHRFSGSKAEASAPPGPYYRLLQLNLRFDNLTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCH KEVLSLIGRSNADVVTLEEVSGMWRRELSFIEKAYPYRQFCPRPGVGGVAILSRRPFLHP HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEECCCCCCCC STAKCLNRHALAIATINFGGAAVDVVALHLGWPWPFEQSQQIGPVAKTLETKLGSSAILA CHHHHHCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEE GDLNAAPWSATAERLAKAGGFTRLRHIGPTWLARNLPDWLRRTAGLPIDNIFVKGRVAVL CCCCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHCCCHHHHHHHCCCCHHHEEECCHHHHH QTKRLESVGSDHLPLLVEFSLLPGPQQEPVFQAGL HHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure TQHRRSNLFAAAIWVAALLLSVPLVLGLLKYVHPAFDSFAHLRAHLAVLLALTAFPLLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LARWRAYGALALALAIMAFTSVLDISLLHRFSGSKAEASAPPGPYYRLLQLNLRFDNLTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCH KEVLSLIGRSNADVVTLEEVSGMWRRELSFIEKAYPYRQFCPRPGVGGVAILSRRPFLHP HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEECCCCCCCC STAKCLNRHALAIATINFGGAAVDVVALHLGWPWPFEQSQQIGPVAKTLETKLGSSAILA CHHHHHCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEE GDLNAAPWSATAERLAKAGGFTRLRHIGPTWLARNLPDWLRRTAGLPIDNIFVKGRVAVL CCCCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHCCCHHHHHHHCCCCHHHEEECCHHHHH QTKRLESVGSDHLPLLVEFSLLPGPQQEPVFQAGL HHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA