| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633241
Identifier: 110633241
GI number: 110633241
Start: 977002
End: 977532
Strand: Reverse
Name: 110633241
Synonym: Meso_0884
Alternate gene names: NA
Gene position: 977532-977002 (Counterclockwise)
Preceding gene: 110633259
Following gene: 110633240
Centisome position: 22.15
GC content: 53.86
Gene sequence:
>531_bases TTGCCCCTTACGATCCTTGTCCAGCTCATGCAGCTTGTTTCCTGGCGGCGCTTTGAGGTCTCTTATCTCTCTAGCTGCTT CGATCATCCGCAACTTGCGCCTTGCGACTTTAACTATGTTCGTCGGGAATCCGGCTGGGCAGACCCCGTTGAACACGCTT TCCGTGGCCGCGTCAGCAAAGCTACGGATCATGCGTCTTCTCTTCATCTAACGTATCAGGCTTCGATACGTTCCGCAATA CGGATCGTATCACGAACCGATACCAACGATCGCCGTTCAACTGTGGATGCCCCCTCCCGCGTCGTGGCGGCAACCTACTT CTTTTTTCGCAGAAAGAGGAGTCTTCTTGGCGTATGGCCTTCACCTATCCGCCGATACGCCGACGCTCATCTTCGGCCTG TACCCACGGTCTTCAGCCCCCTCTACACCGCTCATCCTGAGCGCCGCACGTCAGGATCATTTTCCCACACCGCAAATTTC ATAAGCTTTTCCCTTAACAGGGATCAACCTTCTGCCTACCAAATGTGTTAA
Upstream 100 bases:
>100_bases CTTCCTTACTCACCTGTGATAGTCGGTGATCTCAACCTGATAGGCGTCACCGTCACTCCAAACAAAACACACTCGATACT GGCTATTTATCCAAAGCCCA
Downstream 100 bases:
>100_bases GCTTAGCTGGGGTAGGCTCGCGCGTACCTAAAGCCGCGTTGTTTCGCGGTGCAGCGAGAGCAGGAAGGACGCCGGGCTGT TCGGTCATGGTAGAGAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MPLTILVQLMQLVSWRRFEVSYLSSCFDHPQLAPCDFNYVRRESGWADPVEHAFRGRVSKATDHASSLHLTYQASIRSAI RIVSRTDTNDRRSTVDAPSRVVAATYFFFRRKRSLLGVWPSPIRRYADAHLRPVPTVFSPLYTAHPERRTSGSFSHTANF ISFSLNRDQPSAYQMC
Sequences:
>Translated_176_residues MPLTILVQLMQLVSWRRFEVSYLSSCFDHPQLAPCDFNYVRRESGWADPVEHAFRGRVSKATDHASSLHLTYQASIRSAI RIVSRTDTNDRRSTVDAPSRVVAATYFFFRRKRSLLGVWPSPIRRYADAHLRPVPTVFSPLYTAHPERRTSGSFSHTANF ISFSLNRDQPSAYQMC >Mature_175_residues PLTILVQLMQLVSWRRFEVSYLSSCFDHPQLAPCDFNYVRRESGWADPVEHAFRGRVSKATDHASSLHLTYQASIRSAIR IVSRTDTNDRRSTVDAPSRVVAATYFFFRRKRSLLGVWPSPIRRYADAHLRPVPTVFSPLYTAHPERRTSGSFSHTANFI SFSLNRDQPSAYQMC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20241; Mature: 20110
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLTILVQLMQLVSWRRFEVSYLSSCFDHPQLAPCDFNYVRRESGWADPVEHAFRGRVSK CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHCCCHH ATDHASSLHLTYQASIRSAIRIVSRTDTNDRRSTVDAPSRVVAATYFFFRRKRSLLGVWP HHCCCHHEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC SPIRRYADAHLRPVPTVFSPLYTAHPERRTSGSFSHTANFISFSLNRDQPSAYQMC HHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHEEEEEECCCCCCCCCCC >Mature Secondary Structure PLTILVQLMQLVSWRRFEVSYLSSCFDHPQLAPCDFNYVRRESGWADPVEHAFRGRVSK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHCCCHH ATDHASSLHLTYQASIRSAIRIVSRTDTNDRRSTVDAPSRVVAATYFFFRRKRSLLGVWP HHCCCHHEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC SPIRRYADAHLRPVPTVFSPLYTAHPERRTSGSFSHTANFISFSLNRDQPSAYQMC HHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA